Name : irp7 (YE2614)
Accession : YP_001006812.1
PAI name : HPI
PAI accession : NC_008800_P1
Strain : Yersinia enterocolitica 8081
Virulence or Resistance: Not determined
Product : inner membrane ABC-transporter YbtQ
Function : -
Note : -
Homologs in the searched genomes : 70 hits ( 70 protein-level )
Publication :
-Delihas,N., "Annotation and evolutionary relationships of a small regulatory RNA gene micF and its target ompF in Yersinia species", BMC Microbiol. 3, 13 (2003) PUBMED 12834539 REMARK Publication Status: Online-Only.
-Delihas,N., "Direct Submission", Submitted (19-JAN-2007) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
-Thomson,N.R., "Direct Submission", Submitted (30-JUN-2006) Thomson N.R., Pathogen Sequencing Unit, The Wellcome Trust Sanger Institute, Genome Campus, Hinxton, Cambridge, CB10 1SA, UNITED KINGDOM.
-Thomson,N.R., Howard,S., Wren,B.W., Holden,M.T., Crossman,L., Challis,G.L., Churcher,C., Mungall,K., Brooks,K., Chillingworth,T., Feltwell,T., Abdellah,Z., Hauser,H., Jagels,K., Maddison,M., Moule,S., Sanders,M., Whitehead,S., Quail,M.A., Dougan,G., Parkh, "The complete genome sequence and comparative genome analysis of the high pathogenicity Yersinia enterocolitica strain 8081", PLoS Genet. 2 (12), E206 (2006) PUBMED 17173484.
| DNA sequence : | |
ATGAAAGACAATAATCCTGCGGATAACCTGGCCTGGCGCGTCATCTGGCGCCAGCTTATCTCCAGCGTTGGCAGTCAGGC
CAGGATGCTGCGGCGCAGTATGCTGGCGCTGTTGCTGGCGGCATTCATGCAGGGGATCGCCTTTGCCTGTCTTTATCCGA
TCATTGATGCGCTGTTACGGGGAGACGCGCCGCAACTTCTCAACTGGGCTGTGGCCTTCAGCGTCGCCGCGATTGTGACG
CTGGCGCTACGCTGGTATGGCTTGGGCTTTGAATACCGTGGTCATCTGGCGCAGGCCACCCATGAGTTGCGCCTGCGACT
TGGCGAGCAGTTACGCCGCGTGCCGCTGGAGAAGATCCAGCGTGGCAGGGCGGGCGAAATGAACGCCTTGCTGCTGGGCT
GCGTGGATGAAAACCTTAATTATGTTATTGCGATAGCCAATATTTTGCTGCTCACCATTGTCACGCCGCTGACGGCGTCG
CTGGCGACATTGTGGATAGACTGGCGGCTGGGGCTGGTGATGTTGCTGATCTTCCCTCTGCTGGTGCCGTTTTATTACTG
GCGCCGCCCGGCGATGCGGCGACAAATGCAGACGCTGGGGGAAGCGCACCAGCGTCTGAGCGGCGATATCGTTGAATTTG
CTCAGGGGATGATGGTATTGCGCACCTGCGGCAGCGATGCCGATAAAAGCCGGGCGCTGCTGGCGCATTTCAATACGCTG
GAAAACTTACAGACCCGCACTCACCGTCAGGGCGCTGGCGCGACGATGCTGATCGCCAGCGTCGTGGAGTTGGGCCTACA
GGTGGTGGTGTTATCCGGGATCGTCTGGGTGGTGACGGGCACTCTGAACCTCGCCTTTTTGATTGCCGCCGTCGCGATGA
TTATGCGCTTCGCAGAACCGATGGCGATGTTTATCAGCTACACCTCGGTTGTGGAACTGATCGCCAGCGCCCTGCAACGG
ATTGAGCAGTTTATGGCGATAGCACCGCTTCCCGTCGCAGCGCAAAGCGAGATGCCGGAACGTTACGATATCCGCTTTGA
CAACGTCAGCTATCGCTACGAAGAAGGCGACGGCCACGCGCTTAATCATGTTTCTTTGACGTTCCCGGCGGCCAGTATGA
GCGCGCTGGTGGGCGCCTCCGGCGCAGGCAAAACCACGGTCACTAAACTGTTAATGCGCTATGCCGATCCGCAGCAAGGG
CAGATTTCTATTGGCGGCGTCGATATTCGCCGCCTGACGCCGGAACAGCTCAATAGCCTGATTTCTGTTGTTTTCCAGGA
TGTCTGGCTGTTTGATGACACGCTGCTGGCGAATATCCGTATCGCGCGCCCACAGGCGACGCGACAGGAGGTGGAAGAGG
CAGCCCGCGCGGCGCAGTGCCTTGAGTTTATTTCCCGTCTTCCGCAAGGCTGGCTGACGCCAATGGGGGAGATGGGCGGC
CAGCTATCGGGCGGCGAGCGCCAGCGGATTTCCATTGCCAGAGCGTTATTGAAAAACGCGCCGGTCGTCATTCTCGATGA
ACCGACCGCCGCGCTGGATATTGAAAGCGAGCTGGCGGTGCAAAAAGCGATCGATAACCTGGTCCACAACCGGACGGTGA
TTATCATCGCTCACCGTTTATCCACCATCGCCGGGGCCGGAAACATCCTGGTGATGGAAGAGGGACAGGTGGTTGAGCAG
GGTACTCATGCGCAATTGCTCTCTCATCATGGACGTTATCAGGCGCTGTGGCAGGCGCAAATGGCCGCGCGCGTGTGGCG
CGACGACGGGGTTTCCGCGTCTGGAGAGTGGGTGCATGAGTGA
|
| Protein sequence : | |
MKDNNPADNLAWRVIWRQLISSVGSQARMLRRSMLALLLAAFMQGIAFACLYPIIDALLRGDAPQLLNWAVAFSVAAIVT
LALRWYGLGFEYRGHLAQATHELRLRLGEQLRRVPLEKIQRGRAGEMNALLLGCVDENLNYVIAIANILLLTIVTPLTAS
LATLWIDWRLGLVMLLIFPLLVPFYYWRRPAMRRQMQTLGEAHQRLSGDIVEFAQGMMVLRTCGSDADKSRALLAHFNTL
ENLQTRTHRQGAGATMLIASVVELGLQVVVLSGIVWVVTGTLNLAFLIAAVAMIMRFAEPMAMFISYTSVVELIASALQR
IEQFMAIAPLPVAAQSEMPERYDIRFDNVSYRYEEGDGHALNHVSLTFPAASMSALVGASGAGKTTVTKLLMRYADPQQG
QISIGGVDIRRLTPEQLNSLISVVFQDVWLFDDTLLANIRIARPQATRQEVEEAARAAQCLEFISRLPQGWLTPMGEMGG
QLSGGERQRISIARALLKNAPVVILDEPTAALDIESELAVQKAIDNLVHNRTVIIIAHRLSTIAGAGNILVMEEGQVVEQ
GTHAQLLSHHGRYQALWQAQMAARVWRDDGVSASGEWVHE
|
|
