Name : DIP2013 (DIP2013)
Accession : NP_940344.1
PAI name : Not named
PAI accession : NC_002935_P5
Strain : Corynebacterium diphtheriae 241
Virulence or Resistance: Not determined
Product : surface-anchored fimbrial subunit
Function : -
Note : Similar to Actinomyces naeslundii fimbrial subunit type 2 precursor SW:FM2_ACTNA (P12616) (534 aa) fasta scores: E(): 4.4e-20, 28.827% id in 503 aa, and to Actinomyces naeslundii type-1 fimbrial major subunit precursor FimP TR:Q9X4D8 (EMBL:AF107019) (533
Homologs in the searched genomes : 11 hits ( 11 protein-level )
Publication :
-Cerdeno-Tarraga,A.M., "Direct Submission", Submitted (03-OCT-2003) Cerdeno-Tarraga A.M., submitted on behalf of the Pathogen Sequencing Unit, Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA E-mail: amct@sanger.ac.uk.
-Cerdeno-Tarraga,A.M., "Direct Submission", Submitted (08-APR-2002) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
-Cerdeno-Tarraga,A.M., Efstratiou,A., Dover,L.G., Holden,M.T., Pallen,M., Bentley,S.D., Besra,G.S., Churcher,C., James,K.D., De Zoysa,A., Chillingworth,T., Cronin,A., Dowd,L., Feltwell,T., Hamlin,N., Holroyd,S., Jagels,K., Moule,S., Quail,M.A., Rabbinowits, "The complete genome sequence and analysis of Corynebacterium diphtheriae NCTC13129", Nucleic Acids Res. 31 (22), 6516-6523 (2003) PUBMED 14602910.
| DNA sequence : | |
ATGACTGCACGGGGGTGTCGTCTGGCGACACTTGCAACGACTTTGACATTCTTTGTATCAAACGTCACACTTGCCTCAGT
GTTTGCTGAAGAGTCACAGTATCATGCAGTCCAACTAGGAGAGAGTCCTCTCAGCGTTGACGGCCTTAGTATCCCAGAAC
GTACGAGTATTGCCGTGCATGCATTGATGGGACTGCCTACGGGACAGCCGGCTAATGGTACAAAGCTCGATTCGATTGGC
CTGCCAAAAGTAGATGGCATGTCGTTTACGCTCTACAGGGTTAACGAAATTGATCTGACTACGCAAGCGGGATGGGATGC
GGCGTCGAAAATCAAGCTGGAAGAGCTCTATACAAACGGCCATCCAACCGACAAAGTAACCAAAGTCGCCACTAAGAAAA
CCGAAGGCGGCGTGGCAAAATTTGATAACCTCACACCAGCCCTCTACCTCGTCGTTCAAGAGCTCAACGGCGCAGAGGCT
GTGGTGCGTTCGCAACCGTTCTTGGTGGCAGCGCCACAGACAAACCCGACTGGCGACGGCTGGCTCCAAGACGTGCACGT
GTATCCCAAGCACCAGGCTTTGTCTGAGCCGGTGAAAACTGCTGTGGATCCGGATGCCACGCAGCCTGGTTTCTCGGTGG
GGGAGAACGTGAAGTATCGCGTGGCTACCAAGATTCCAGAGATCGCCTCGAACACTAAGTTCGAGGGTTTCACCGTGGCG
GATAAACTCCCCGCTGAATTGGGCAAACCAGACACTAATAAAATAACGGTAACCCTTGGGGGAAAGCCGATTAATTCCAC
CGACGTCTCTGTTCAAACCTATCAAGTCGGTGACCGCACCGTACTCAGCGTGCAACTAGCCGGCGCAACACTCCAGTCCT
TGGACCAGCATAAAGATCAAGAACTAGTCGTCGAGTTTGAGGCACCTGTGACCAAGCAGCCAGAAAACGGCCAGCTAGAT
AACCAAGCATGGGTACTACCGAGTAACCCCACTGCTCAGTGGGATCCAGAAGAAAGCGGCGATGCTGCGTTGCGCGGTAT
GCCGTCGTCACGCGTGAGTTCCAAGTTCGGCCAGATCACGATTGAGAAATCCTTTGACGGCAACACCCCAGGTGCCGATC
GCACCGCGACGTTCCAGCTGCATCGTTGCGAGGCCGACGGCAGCCTAGTCAAGTCCGACCCACCGATCTCCCTTGATGGC
AAGCAGGAGTTTGTTACCGGCCAAGATGGTAAGGCCGTACTCAGCGGTATCCACTTGGGCACCTTGCAGCTCGAGTCCAA
TGTTATGAAATATACCGACGCGTGGGCCGGCAAGGGAACCGAATTCTGCCTGGTAGAAACAGCTACTGCCAGCGGATATG
AGCTGTTGCCTAAGCCAGTGATAGTAAAGCTGGAAGCCAACGAGTCTACCAACGTGTTGGTAGAACAAAAAGTAAAGATC
GACAACAAGAAAAAGAACGCCGGATTTGAACTGCCACTCACAGGTGGTTCGGGGCGCATCGCCATCACTATCGGCATCGT
TGGTTTGCTCGTCGCCCTCGCAAGCTATGTCTTATCGCGTAGGAAGGACAACCGCTAG
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| Protein sequence : | |
MTARGCRLATLATTLTFFVSNVTLASVFAEESQYHAVQLGESPLSVDGLSIPERTSIAVHALMGLPTGQPANGTKLDSIG
LPKVDGMSFTLYRVNEIDLTTQAGWDAASKIKLEELYTNGHPTDKVTKVATKKTEGGVAKFDNLTPALYLVVQELNGAEA
VVRSQPFLVAAPQTNPTGDGWLQDVHVYPKHQALSEPVKTAVDPDATQPGFSVGENVKYRVATKIPEIASNTKFEGFTVA
DKLPAELGKPDTNKITVTLGGKPINSTDVSVQTYQVGDRTVLSVQLAGATLQSLDQHKDQELVVEFEAPVTKQPENGQLD
NQAWVLPSNPTAQWDPEESGDAALRGMPSSRVSSKFGQITIEKSFDGNTPGADRTATFQLHRCEADGSLVKSDPPISLDG
KQEFVTGQDGKAVLSGIHLGTLQLESNVMKYTDAWAGKGTEFCLVETATASGYELLPKPVIVKLEANESTNVLVEQKVKI
DNKKKNAGFELPLTGGSGRIAITIGIVGLLVALASYVLSRRKDNR
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