Name : DIP0236 (DIP0236)
Accession : NP_938627.1
PAI name : Not named
PAI accession : NC_002935_P3
Strain : Corynebacterium diphtheriae 241
Virulence or Resistance: Not determined
Product : fimbrial associated sortase-like protein
Function : -
Note : Similar to Actinomyces naeslundii fimbrial associated protein TR:O68213 (EMBL:AF019629) (365 aa) fasta scores: E(): 1.2e-31, 42.802% id in 257 aa, and to Staphylococcus aureus sortase SrtA TR:Q9S446 (EMBL:AF162687) (206 aa) fasta scores: E(): 0.094, 27.55
Homologs in the searched genomes : 134 hits ( 134 protein-level )
Publication :
-Cerdeno-Tarraga,A.M., "Direct Submission", Submitted (03-OCT-2003) Cerdeno-Tarraga A.M., submitted on behalf of the Pathogen Sequencing Unit, Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA E-mail: amct@sanger.ac.uk.
-Cerdeno-Tarraga,A.M., "Direct Submission", Submitted (08-APR-2002) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
-Cerdeno-Tarraga,A.M., Efstratiou,A., Dover,L.G., Holden,M.T., Pallen,M., Bentley,S.D., Besra,G.S., Churcher,C., James,K.D., De Zoysa,A., Chillingworth,T., Cronin,A., Dowd,L., Feltwell,T., Hamlin,N., Holroyd,S., Jagels,K., Moule,S., Quail,M.A., Rabbinowits, "The complete genome sequence and analysis of Corynebacterium diphtheriae NCTC13129", Nucleic Acids Res. 31 (22), 6516-6523 (2003) PUBMED 14602910.
| DNA sequence : | |
GTGGATCACACCCTCAGCACTGACGTCGAACCGGAGAAGGAACCGCGCCGTGCCAACAGCGCCAAAACCAGCCCCGTGCT
GGCCGCGGTGCTCGTGATCCTTGGGGTGCTCGTGATGCTGTACCCGGTGACGTCCACCCTGTGGAATAACCACCTAGCCA
CGAAGGCCGCGCAGGAATACGCAAAACTCGAAAAGAATGCCCCACAAGAGGTGAAGAATACCCAGTGGGAGCGTGCCCAC
GAGTACAACGAGAACCGAACAACCGGCCCCATCTTTGACCCCTGGCTCGCCCGCTTCGACGAGAACAACTCGGACTACCA
AGAATACCTGGACCAACTCGACGCGAACGACGCGATGGCGCGCCTCATCTTCCCCAAGATCAAGGCAGACCTGCCGATTT
TCCACGGGACAGATAACGACACTTTGCAAAAAGGCTTGGGGCACCTCTTCGGCTCCGACCTGCCGGTCGGCGGTAAGGGC
ATGCACTCGGTGATCACCGGCCACACGGGCCTAGCGAACTCGACCATGTTCGACCACCTCAACAAGGCGGAGAAGGGTGA
TACCTTCTATGTCCAGGTTTCCGGCGAGAAGCTGAAGTATGTGGTCGACCAGATCAAGGTTGTGCTCCCCACCGAAACCG
AGGATCTCCGCCCAGAGCAGGGCAAGGACTACATCACCCTGATCACCTGCACTCCCTACGGGATCAACACGCACCGCCTG
ATGGTGCGCGGCCACCAGGTCCCGCTGGCCCCGGAAGATCACGAGGTTTTCGACAAGAACCACGGTGCCGGGTGGCAGTG
GTGGATGTACACGCTACTCGCGGCAGCAGCTGTCGTGCTGCTCCTGCTGCTGCGGTGGCTACTGAAGAACAAGCGGGATG
GCGAATCCCAAGAAACGACAGAGATGATGAATGACGAAGGGGCTGGAGCAGATGACTAG
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| Protein sequence : | |
MDHTLSTDVEPEKEPRRANSAKTSPVLAAVLVILGVLVMLYPVTSTLWNNHLATKAAQEYAKLEKNAPQEVKNTQWERAH
EYNENRTTGPIFDPWLARFDENNSDYQEYLDQLDANDAMARLIFPKIKADLPIFHGTDNDTLQKGLGHLFGSDLPVGGKG
MHSVITGHTGLANSTMFDHLNKAEKGDTFYVQVSGEKLKYVVDQIKVVLPTETEDLRPEQGKDYITLITCTPYGINTHRL
MVRGHQVPLAPEDHEVFDKNHGAGWQWWMYTLLAAAAVVLLLLLRWLLKNKRDGESQETTEMMNDEGAGADD
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