Name : HH0252 (HH0252)
Accession : NP_859783.1
PAI name : HHGI1
PAI accession : NC_004917_P1
Strain : Helicobacter hepaticus ATCC 51449
Virulence or Resistance: Not determined
Product : hypothetical protein
Function : -
Note : similar to Vibrio cholerae IcmF; VirB10-like protein
Homologs in the searched genomes : 3 hits ( 3 protein-level )
Publication :
-Drescher,B. and Suerbaum,S., "Direct Submission", Submitted (27-MAY-2003) Institute of Hygiene and Microbiology, University of Wuerzburg, Josef Schneider Str. 2, Wuerzburg D-97080, Germany.
-Suerbaum,S., Josenhans,C., Sterzenbach,T., Drescher,B., Brandt,P., Bell,M., Droge,M., Fartmann,B., Fischer,H.P., Ge,Z., Horster,A., Holland,R., Klein,K., Konig,J., Macko,L., Mendz,G.L., Nyakatura,G., Schauer,D.B., Shen,Z., Weber,J., Frosch,M. and Fox,J.G., "The complete genome sequence of the carcinogenic bacterium Helicobacter hepaticus", Proc. Natl. Acad. Sci. U.S.A. 100 (13), 7901-7906 (2003) PUBMED 12810954.
-Suerbaum,S., Josenhans,C., Sterzenbach,T., Drescher,B., Brandt,P., Bell,M., Droge,M., Fartmann,B., Fischer,H.P., Ge,Z., Horster,A., Holland,R., Klein,K., Konig,J., Macko,L., Mendz,G.L., Nyakatura,G., Schauer,D.B., Shen,Z., Weber,J., Frosch,M. and Fox,J.G., "Direct Submission", Submitted (26-JUN-2003) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
| DNA sequence : | |
ATGTTTGGCAAGATATTTAATTATCTCAAATCAAAAACTTTTCTCTATATTTTACTTATATGTTTTGCGTTGCTTTTAAG
TGTACTTTTTTACATATACTCGCCCTTATTTGCATTTAATGATATTTATATTTTTAGTAGCGCATTAACAAGAATCCAAG
TGCTTATTGTCGTATGGCTTTTAATCTTTTTTATCTTTCTTTATAGACCACTTATTCATCTTATTCAATCGCTCAAAAAT
GAGAAACACATACAGTACAAGGAAATCAAACAAGAAGTTACAAAGGCATTCCGCAGGGCTAAAAGAAATTATTTCATTGC
TCTAAATGACGCAAAGAGTATGTGGAAAAGAAAACTCTATCTTAAAAATATCCCTTTAGTGATTATTATTGGTAATGAGG
GAGCAGGCAAAAGCTCGTTTATCAATTATGCGAATATACAATATCCATTGAGTGAAAGCTTGACATCTTATAAGAAATTT
CACAAATCTACCAACAACTTCAATCTTTACATTTCTCAAAAGGGTGCATTGCTTGATACAGAAGGTAATTATTTTGCACA
AGAGAACTTTCGGCAAACAAGTAATACCGATGAAATTGCTGAAGATAATTTAGAAAAGAATAAAGATTTTTTAATCAAAA
AGGGCGTATGGAATCAATTCTTACACTTCCTTAATACTAATACCTTTCATAGCAAACTTAATGGCATTGTGCTTATTATT
GATGTGCATGCTTTTTTACAGAATCCAAAGCAATATGAACAAAATGTCTTACAATATCTAAGCAAAAGAGTGAGTGATTG
CGAAGAAAATCTAGGCTTGCAACTCCCCATTTATATTGTTTTTAATAAAATTGACTTGTTAGAGGGTATGCGGACATATT
GGGACATCTTTGATGAAAGCATTGCAAATAAAATGCTAGGACTTACTTTAGATAAAAATAGTAGCAAATTAGAACTACAA
AATACTTTTACAGAATTAAGCAATTCATTGCTCTATACTTTTATGCGTAGAAATCAATCCTTACATTCACTTGAAGACAA
AAATTTAGCCCTTTTATTTTTAAAGCAACTTGATGTGCTTTTTGCCCTTGCAATAGACTTTATCCTCCAAGCAAAGGAAC
AAAATGCCTTTAAAAACAAATCCTATATCCGCGGCGTATATTTTACCTCCGCATACCAAGAAAATGTCCCCAGAAATTAC
TTGCTTGATGCTGTGTGTGAAAAATACGAAATCAAAAAACCTCCGGCAAAATCCGCAACCAAGCAAAATAAGCGAAGCTA
CTTTGTGCAGGGTTTGTTAGAACATATTTTTCTTAAAGATGCACATCTAAGCAGTATGATTAAAACCTCTTGGCAAACTT
TCAAACTCGCCTTTGGAACTATAAGTATATGTATATTTGGATATGTTTTTTGCACTTATTTAATCCATAAAACCTATAAA
GAAGTAGATAAAAGCCATATCACATTTAATAGCATTACTTCATTACTTGCCAATACAAGCTCTTATGAACATCTTACCCT
GCAAGAAAAAACCGAACTTATGCTTCATCTTAAAGCCATACTCAAAAACTATCCATCTCTATTTGAAAAGCCCTCCATTA
TACAGTATTTTTCACTGAATTTCTCCTATCAAGGATTTTTGCCTGCAAGAGACTTTTATTATGCTATCAATGAAGAAGTG
ATTGGCAAAACATTGCTTAGAGAAATGGAGCAGATTCTCTTACACAATACCGATCAAACCACACTTATTGAAACCATCTA
TATGTATCAATCACTCTATGATGAAGCATATATAAATAAACCTCTTTTGGCAAATTGGGTTATAAAGAATTGGCAACCTT
TTGCTAAATATAAAATTCCAAAAGATGATTTTATTACCGCTATTGAAGATTTAGCTATAGGCAATCTCTCACATACACAA
CCAAAAGATACACAAGCGCTACACATAGCAAAAACTCAAATTATGCAATTAGAGCAACAACAGAGAATCTATACCATTAT
GGCTTTTAGAAATAGCCTAAAAAAACAAAGCTTTTTTAACCTTAAAGATAAGGTAGGCACAGCATTTTATATGATATTTG
AGCATACTGATAAATTAAGTCAAATTGACAAAACCTATACAAAAGATGGTCTAATGGAGTTTTTAAGTAATTTAGATACC
AATATACAAACTGCTATCAAAATAGAATCTTGGGCGTATAATGAAAAAATGCAATACCAAGCCCTCACAGAACAAGCACA
AAGAGATTTATACACACATATTATTAGTATTTACCTTAATGATTATAAACAAAGATGGGAAGAATTACTTCAGGCTATAT
CTCCTAAGCAATATACCGACAAAAACAATATACTCACACAATTACAAATCTTATCAGAATCTACCAATCCACTCAATAGT
CTCATTAAAATCGTAAATGATAATACCCACCTAAACGACACTCTTTTGCTTAATTACGCATACGGCTTAGGATTGCCAAG
CTCAGATATTAAAGCACAATTTACATATATTAGTAACTCCTTTAAAGATTATTATGACTTCATAGGAGAAAAATCCTTAC
TTCTCTCTCAAATAGATTCCTTTAATGACATAAAAAAGCAAAGTAGCACGGAAGAAATAAAAGAGATACTCGCTAAAGAT
ATACAAAATATGAGTGGTAAAATTACAGAATTTACAAAAGATGATACAAAAAACATAAAAGATAAGCTTATATATATCCT
TGAAGGAAGTAATGATGAAACTGACGCATTTGTAGAGCTAAAGCGAAACACAGCAATGTTGCCTCATGCGTTAAAACAAT
ACTACAATGAGATTTCTACACTCTCTTGGAACGTTATAGAAAAAAGCACCTATGCACTTCTAAATAATGCATGGAAAAAA
GAGGTGTATGATACTTTTATAAATGATATCTCCCCTTTTTATCCTTTCAATGCTTACTCGGATAAATCCTTGCCACTCAA
CACTTTTAAAGATTTTTTTGGCAATACAGGCACATTACAATCTTTTTATACGCAATATCTAAGTAAAATTTTGCAAAAAA
AAGGCAATACCTATGTGCCAAATCCTGCCTATAGCGAGACGATAAAGCTTTCTGCTCAATTTATAAGTTTTTTTAACCAA
ATAAGCAATCTCAATAGCATATTTGATAATAACAATAACCTTACACTTAACTTTTTTATACAATGCCTTGGTTTATCATC
AGATTTTAGCTCTCTTGATATAAGCTATAACAACCAGACTTTACACTATGATCACACGCTTAATCCTAAAATCCAGATTA
TTATTGAACAATTCAATAGTAGCACGGAGTTACGTTTGAGCGTGAATGACTATTACCAAATGCCTCAATACAATAAAATT
TATAGTGGCGAATGGGCGTGGCTTAGATTCATAAAAGACATTACACCTGCTCAAAATACAGGCAACACTCTTTACTTTGA
AAATAATAAACAATGGTATTTTGATTTTAGCATTACTCCAAATAGGCTAGAACTTTTACATTTAAGCCGTATTCTAACGC
ATTTTAATATGCCTCAACTTATCACTCAACAATAA
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| Protein sequence : | |
MFGKIFNYLKSKTFLYILLICFALLLSVLFYIYSPLFAFNDIYIFSSALTRIQVLIVVWLLIFFIFLYRPLIHLIQSLKN
EKHIQYKEIKQEVTKAFRRAKRNYFIALNDAKSMWKRKLYLKNIPLVIIIGNEGAGKSSFINYANIQYPLSESLTSYKKF
HKSTNNFNLYISQKGALLDTEGNYFAQENFRQTSNTDEIAEDNLEKNKDFLIKKGVWNQFLHFLNTNTFHSKLNGIVLII
DVHAFLQNPKQYEQNVLQYLSKRVSDCEENLGLQLPIYIVFNKIDLLEGMRTYWDIFDESIANKMLGLTLDKNSSKLELQ
NTFTELSNSLLYTFMRRNQSLHSLEDKNLALLFLKQLDVLFALAIDFILQAKEQNAFKNKSYIRGVYFTSAYQENVPRNY
LLDAVCEKYEIKKPPAKSATKQNKRSYFVQGLLEHIFLKDAHLSSMIKTSWQTFKLAFGTISICIFGYVFCTYLIHKTYK
EVDKSHITFNSITSLLANTSSYEHLTLQEKTELMLHLKAILKNYPSLFEKPSIIQYFSLNFSYQGFLPARDFYYAINEEV
IGKTLLREMEQILLHNTDQTTLIETIYMYQSLYDEAYINKPLLANWVIKNWQPFAKYKIPKDDFITAIEDLAIGNLSHTQ
PKDTQALHIAKTQIMQLEQQQRIYTIMAFRNSLKKQSFFNLKDKVGTAFYMIFEHTDKLSQIDKTYTKDGLMEFLSNLDT
NIQTAIKIESWAYNEKMQYQALTEQAQRDLYTHIISIYLNDYKQRWEELLQAISPKQYTDKNNILTQLQILSESTNPLNS
LIKIVNDNTHLNDTLLLNYAYGLGLPSSDIKAQFTYISNSFKDYYDFIGEKSLLLSQIDSFNDIKKQSSTEEIKEILAKD
IQNMSGKITEFTKDDTKNIKDKLIYILEGSNDETDAFVELKRNTAMLPHALKQYYNEISTLSWNVIEKSTYALLNNAWKK
EVYDTFINDISPFYPFNAYSDKSLPLNTFKDFFGNTGTLQSFYTQYLSKILQKKGNTYVPNPAYSETIKLSAQFISFFNQ
ISNLNSIFDNNNNLTLNFFIQCLGLSSDFSSLDISYNNQTLHYDHTLNPKIQIIIEQFNSSTELRLSVNDYYQMPQYNKI
YSGEWAWLRFIKDITPAQNTGNTLYFENNKQWYFDFSITPNRLELLHLSRILTHFNMPQLITQQ
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