Name : S4823 (S4823)
Accession : NP_838461.1
PAI name : SHI-1
PAI accession : NC_004741_P1
Strain : Shigella flexneri 2002017
Virulence or Resistance: Not determined
Product : hypothetical protein
Function : -
Note : residues 1 to 253 of 253 are 75.88 pct identical to residues 148 to 400 of 400 from NRprotein_Feb03 : >dbj|BAA77991.1| traF [Plasmid R64] dbj|BAB91674.1| 99 pct identical to gp:AB021078_83[TraF of plasmid ColIb-P9] [Salmonella typhimurium]
Homologs in the searched genomes : 12 hits ( 11 protein-level, 1 DNA-level )
Publication :
-Wei,J., Goldberg,M.B., Burland,V., Venkatesan,M.M., Deng,W., Fournier,G., Mayhew,G.F., Plunkett,G. III, Rose,D.J., Darling,A., Mau,B., Perna,N.T., Payne,S.M., Runyen-Janecky,L.J., Zhou,S., Schwartz,D.C. and Blattner,F.R., "Complete genome sequence and comparative genomics of Shigella flexneri serotype 2a strain 2457T", Infect. Immun. 71 (5), 2775-2786 (2003) PUBMED 12704152 REMARK Erratum:[Infect Immun. 2003 Jul;71(7):4223].
-Wei,J., Goldberg,M.B., Burland,V., Venkatesan,M.M., Deng,W., Fournier,G., Mayhew,G.F., Plunkett,G. III, Rose,D.J., Darling,A., Mau,B., Perna,N.T., Payne,S.M., Runyen-Janecky,L.J., Zhou,S., Schwartz,D.C. and Blattner,F.R., "Direct Submission", Submitted (23-APR-2003) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
-Wei,J., Goldberg,M.B., Burland,V., Venkatesan,M.M., Deng,W., Fournier,G., Mayhew,G.F., Plunkett,G. III, Rose,D.J., Darling,A., Mau,B., Perna,N.T., Payne,S.M., Runyen-Janecky,L.J., Zhou,S., Schwartz,D.C. and Blattner,F.R., "Direct Submission", Submitted (13-JUN-2002) Genetics Laboratory, University of Wisconsin - Madison, 445 Henry Mall, Madison, WI 53706, USA.
| DNA sequence : | |
ATGGTTAAATCACACGGCACCGTCAGTGTCGACGGTAAAGTCTCTGATGCTGACCTCACTTACCTGGAAGAGGTGGCAAA
CAGCACCGGGCAGGAGGTGGACAAAAGCCGCCTGACATCACAGGCCTGTGCCCGCACGGCACTGATCACTGATGTGGGTA
TTGCTCTGGCTACGGAACTGGAAACGGCCGGGCAGAAATGGTCTCTGGGCTTCCCCCCCAAATTCCAGCGCGTCGACCTG
TTCAACTACAACGTGCTGGTCAGAAATTATGACAGCAGCGCCTTCAAAGGCGACCGCTACCACAACACGAAAAATGGCAT
CAACGCCGACATCGGTGCCAGTACGGACCTGGATGACAACTGGACGCTGGGACTGGTCGCACAGAACCTGATCTCCCGTA
GTATTGAGACAAAAGAAGTGAACGGTATCACGGAAACCTTCAGGATCCGCCCGCAGGTGACGGCCGGTGTCTCCTGGCAC
AACGCGATGTTCACCACTGCATTTGATGTGGATCTGACCCCGGCCAGCGGTTTCACCTCCGACAGCAACCGTCAGTTTGC
CGCCATTGGCACAGAATTTAATGCCTGGAAATGGGCACAGCTGCGCGCCGGTTACCGTCAGAATCTGGCCGGTAACGACG
GCAGTGCATTCACGGCCGGGGTGGGGATCTCACCGTTTGATGTGGTTCACCTTGATGTTGCAGGCCTGATCGGCACGGAC
AACACTTACGGTGCGGTCGCACAGTTCCAGTTCACCTTCTGA
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| Protein sequence : | |
MVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKSRLTSQACARTALITDVGIALATELETAGQKWSLGFPPKFQRVDL
FNYNVLVRNYDSSAFKGDRYHNTKNGINADIGASTDLDDNWTLGLVAQNLISRSIETKEVNGITETFRIRPQVTAGVSWH
NAMFTTAFDVDLTPASGFTSDSNRQFAAIGTEFNAWKWAQLRAGYRQNLAGNDGSAFTAGVGISPFDVVHLDVAGLIGTD
NTYGAVAQFQFTF
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