PAI Gene Information


Name : yscR (t1287)
Accession : NP_805090.1
PAI name : SPI-2
PAI accession : NC_004631_P1
Strain : Salmonella enterica RSK2980
Virulence or Resistance: Virulence
Product : type III secretion system protein
Function : -
Note : part of a set of proteins involved in the infection of eukaryotic cells; in plant pathogens involved in the hypersensitivity response
Homologs in the searched genomes :   510 hits    ( 510 protein-level )  
Publication :
    -Deng,W., Liou,S.-R., Plunkett,G. III, Mayhew,G.F., Rose,D.J., Burland,V., Kodoyianni,V., Schwartz,D.C. and Blattner,F.R., "Direct Submission", Submitted (25-SEP-2002) Laboratory of Genetics, University of Wisconsin - Madison, 445 Henry Mall, Madison, WI 53706, USA.

    -Deng,W., Liou,S.R., Plunkett,G. III, Mayhew,G.F., Rose,D.J., Burland,V., Kodoyianni,V., Schwartz,D.C. and Blattner,F.R., "Comparative genomics of Salmonella enterica serovar Typhi strains Ty2 and CT18", J. Bacteriol. 185 (7), 2330-2337 (2003) PUBMED 12644504.

    -Deng,W., Liou,S.R., Plunkett,G. III, Mayhew,G.F., Rose,D.J., Burland,V., Kodoyianni,V., Schwartz,D.C. and Blattner,F.R., "Direct Submission", Submitted (10-SEP-2004) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.


DNA sequence : 
ATGTCTTTACCCGATTCGCCTTTGCAACTGATTGGTATATTGTTTCTGCTTTCAATACTGCCTCTCATTATCGTCATGGG
AACCTCTTTCCTTAAACTGGCGGTGGTATTTTCGATTTTACGAAATGCTCTGGGTATTCAACAAGTTCCTCCAAATATCG
CACTGTATGGCTTCGCGCTTGTACTTTCCTTATTCATTATGGGGCCGACGCTATTAGCTGTAAAAGAGCGCTGGCATCCG
GTTCAGGTCGCTGGCGCTCCTTTCTGGACGTCTGAGTGGGACAGTAAAGCATTAGCGCCTTATCGACAGTTTTTGCAAAA
AAACTCTGAAGAGAAGGAAGCCAATTATTTTCGGAATTTGATAAAACGAACCTGGCCTGAAGACATAAAAAGAAAGATAA
AACCTGATTCTTTGCTCATATTAATTCCGGCATTTACGGTGAGTCAGTTAACGCAGGCATTTCGGATTGGATTACTTATT
TATCTTCCCTTTCTGGCTATTGACCTGCTTATTTCAAATATACTGCTGGCTATGGGGATGATGATGGTATCGCCAATGAC
CATTTCATTACCGTTTAAGCTGCTAATATTTTTACTGGCAGGCGGTTGGGATCTGACACTGGCGCAATTGGTACAGAGCT
TTTCATGA

Protein sequence : 
MSLPDSPLQLIGILFLLSILPLIIVMGTSFLKLAVVFSILRNALGIQQVPPNIALYGFALVLSLFIMGPTLLAVKERWHP
VQVAGAPFWTSEWDSKALAPYRQFLQKNSEEKEANYFRNLIKRTWPEDIKRKIKPDSLLILIPAFTVSQLTQAFRIGLLI
YLPFLAIDLLISNILLAMGMMMVSPMTISLPFKLLIFLLAGGWDLTLAQLVQSFS