Name : hlyD (c3574)
Accession : NP_755449.1
PAI name : PAI I CFT073
PAI accession : NC_004431_P1
Strain : Escherichia coli 042
Virulence or Resistance: Virulence
Product : hemolysin D
Function : -
Note : Residues 1 to 478 of 478 are 98.95 pct identical to residues 1 to 478 of 478 from SwissProt.40 : >sp|P09986|HLY4_ECOLI Hemolysin secretion protein D, chromosomal
Homologs in the searched genomes : 32 hits ( 32 protein-level )
Publication :
-Welch,R.A., Burland,V., Plunkett,G. III, Redford,P., Roesch,P., Rasko,D., Buckles,E.L., Liou,S.R., Boutin,A., Hackett,J., Stroud,D., Mayhew,G.F., Rose,D.J., Zhou,S., Schwartz,D.C., Perna,N.T., Mobley,H.L., Donnenberg,M.S. and Blattner,F.R., "Extensive mosaic structure revealed by the complete genome sequence of uropathogenic Escherichia coli", Proc. Natl. Acad. Sci. U.S.A. 99 (26), 17020-17024 (2002) PUBMED 12471157.
-Welch,R.A., Burland,V., Plunkett,G. III, Redford,P., Roesch,P., Rasko,D., Buckles,E.L., Liou,S.R., Boutin,A., Hackett,J., Stroud,D., Mayhew,G.F., Rose,D.J., Zhou,S., Schwartz,D.C., Perna,N.T., Mobley,H.L., Donnenberg,M.S. and Blattner,F.R., "Direct Submission", Submitted (10-SEP-2004) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
-Welch,R.A., Burland,V., Plunkett,G.D. III, Redford,P., Roesch,P., Rasko,D.A., Buckles,E.L., Liou,S.-R., Boutin,A., Hackett,J., Stroud,D., Mayhew,G.F., Rose,D.J., Zhou,S., Schwartz,D.C., Perna,N.T., Mobley,H.L.T., Donnenberg,M.S. and Blattner,F.R., "Direct Submission", Submitted (20-JUN-2002) Genetics Laboratory, University of Wisconsin - Madison, 445 Henry Mall, Madison, WI 53706, USA.
| DNA sequence : | |
ATGAAAACATGGTTAATGGGGTTCAGCGAGTTCCTGTTGCGCTATAAACTTGTCTGGAGTGAAACATGGAAAATCCGGAA
GCAATTAGATACTCCGGTACGTGAAAAGGACGAAAATGAATTCTTACCCGCTCATCTGGAATTAATTGAAACGCCGGTAT
CCAGACGGCCGCGTCTGGTTGCTTATTTTATTATGGGGTTTCTGGTTATTGCTGTCATTTTATCTGTTTTAGGTCAGGTG
GAAATTGTTGCCACTGCAAATGGGAAATTAACACTAAGTGGGCGCAGCAAAGAAATTAAACCTATTGAAAACTCAATAGT
TAAAGAAATTATCGTAAAAGAAGGAGAGTCAGTCCGGAAAGGGGATGTGTTATTAAAGCTTACAGCACTGGGAGCTGAAG
CTGATACGTTAAAAACACAGTCATCACTGTTACAGACCAGGCTGGAACAAACTCGGTATCAAATTCTGAGCAGGTCAATT
GAATTAAATAAACTACCTGAACTGAAGCTTCCTGATGAGCCTTATTTTCAGAATGTATCTGAAGAGGAAGTACTGCGTTT
AACTTCTTTGATAAAAGAACAGTTTTCCACATGGCAAAATCAGAAGTATCAAAAAGAACTGAATCTGGATAAGAAAAGAG
CAGAGCGATTAACAATACTTGCCCGTATAAACCGTTATGAAAATTTATCGAGAGTTGAAAAAAGCCGTCTGGATGATTTC
AGGAGTTTATTGCATAAACAGGCAATTGCAAAACATGCTGTACTTGAGCAGGAGAATAAATATGTCGAGGCAGCAAATGA
ATTACGGGTTTATAAATCGCAACTGGAGCAAATTGAGAGTGAGATATTGTCTGCAAAAGAAGAATATCAGCTTGTCACGC
AGCTTTTTAAAAATGAAATTTTAGACAAGCTAAGACAAACAACAGACAACATTGAGTTATTAACTCTGGAGTTAGAGAAA
AATGAAGAGCGTCAACAGGCTTCAGTAATCAGGGCCCCTGTTTCGGGAAAAGTTCAGCAACTGAAGGTTCATACTGAAGG
TGGGGTTGTTACAACAGCGGAAACACTGATGGTCATCGTTCCGGAAGATGACACGCTGGAGGTTACTGCTCTGGTACAAA
ATAAAGATATTGGTTTTATTAACGTCGGGCAGAATGCCATCATTAAAGTGGAGGCCTTTCCTTACACCCGATATGGTTAT
CTGGTGGGTAAGGTGAAAAATATAAATTTAGATGCAATAGAAGACCAGAAACTGGGACTCGTTTTTAATGTCATTGTTTC
TGTTGAAGAGAATGATTTGTCAACCGGGAATAAGCACATTCCATTAAGCTCGGGTATGGCTGTCACTGCAGAAATAAAGA
CTGGAATGCGAAGCGTAATCAGCTATCTTCTTAGTCCTCTGGAAGAGTCTGTAACAGAAAGTTTACATGAGCGTTAA
|
| Protein sequence : | |
MKTWLMGFSEFLLRYKLVWSETWKIRKQLDTPVREKDENEFLPAHLELIETPVSRRPRLVAYFIMGFLVIAVILSVLGQV
EIVATANGKLTLSGRSKEIKPIENSIVKEIIVKEGESVRKGDVLLKLTALGAEADTLKTQSSLLQTRLEQTRYQILSRSI
ELNKLPELKLPDEPYFQNVSEEEVLRLTSLIKEQFSTWQNQKYQKELNLDKKRAERLTILARINRYENLSRVEKSRLDDF
RSLLHKQAIAKHAVLEQENKYVEAANELRVYKSQLEQIESEILSAKEEYQLVTQLFKNEILDKLRQTTDNIELLTLELEK
NEERQQASVIRAPVSGKVQQLKVHTEGGVVTTAETLMVIVPEDDTLEVTALVQNKDIGFINVGQNAIIKVEAFPYTRYGY
LVGKVKNINLDAIEDQKLGLVFNVIVSVEENDLSTGNKHIPLSSGMAVTAEIKTGMRSVISYLLSPLEESVTESLHER
|
|
