Name : lpfC (SF3723)
Accession : NP_709462.1
PAI name : SHI-2
PAI accession : NC_004337_P2
Strain : Shigella flexneri 2002017
Virulence or Resistance: Not determined
Product : long polar fimbriae
Function : -
Note : Code: N; COG: COG3188
Homologs in the searched genomes : 60 hits ( 60 protein-level )
Publication :
-Jin,Q., Shen,Y., Wang,J.H., Liu,H., Yang,J., Yang,F., Zhang,X.B., Zhang,J.Y., Yang,G.W., Wu,H.T., Dong,J., Sun,L.L., Xue,Y., Zhao,A.L., Gao,Y.S., Zhu,J.P., Chen,S.X., Yao,Z.J., Wang,Y., Lu,W.C., Qiang,B.Q., Wen,Y.M. and Hou,Y.D., "Direct Submission", Submitted (03-AUG-2011) State Key Laboratory for Moleclular Virology and Genetic Engineering, Microbial Genome Center of Chinese Ministry of Public Health, 6 Rongjing Eastern Street, BDA, Beijing 100176, P.R.China REMARK Sequence update by submitter.
-Jin,Q., Shen,Y., Wang,J.H., Liu,H., Yang,J., Yang,F., Zhang,X.B., Zhang,J.Y., Yang,G.W., Wu,H.T., Dong,J., Sun,L.L., Xue,Y., Zhao,A.L., Gao,Y.S., Zhu,J.P., Chen,S.X., Yao,Z.J., Wang,Y., Lu,W.C., Qiang,B.Q., Wen,Y.M. and Hou,Y.D., "Direct Submission", Submitted (06-DEC-2004) State Key Laboratory for Moleclular Virology and Genetic Engineering, Microbial Genome Center of Chinese Ministry of Public Health, 6 Rongjing Eastern Street, BDA, Beijing 100176, P.R.China REMARK Sequence update by submitter.
-Jin,Q., Shen,Y., Wang,J.H., Liu,H., Yang,J., Yang,F., Zhang,X.B., Zhang,J.Y., Yang,G.W., Wu,H.T., Dong,J., Sun,L.L., Xue,Y., Zhao,A.L., Gao,Y.S., Zhu,J.P., Chen,S.X., Yao,Z.J., Wang,Y., Lu,W.C., Qiang,B.Q., Wen,Y.M. and Hou,Y.D., "Direct Submission", Submitted (21-MAY-2001) State Key Laboratory for Moleclular Virology and Genetic Engineering, Microbial Genome Center of Chinese Ministry of Public Health, 6 Rongjing Eastern Street, BDA, Beijing 100176, P.R.China.
-Jin,Q., Yuan,Z., Xu,J., Wang,Y., Shen,Y., Lu,W., Wang,J., Liu,H., Yang,J., Yang,F., Zhang,X., Zhang,J., Yang,G., Wu,H., Qu,D., Dong,J., Sun,L., Xue,Y., Zhao,A., Gao,Y., Zhu,J., Kan,B., Ding,K., Chen,S., Cheng,H., Yao,Z., He,B., Chen,R., Ma,D., Qiang,B., W, "Genome sequence of Shigella flexneri 2a: insights into pathogenicity through comparison with genomes of Escherichia coli K12 and O157", Nucleic Acids Res. 30 (20), 4432-4441 (2002) PUBMED 12384590.
-Jin,Q., Yuan,Z., Xu,J., Wang,Y., Shen,Y., Lu,W., Wang,J., Liu,H., Yang,J., Yang,F., Zhang,X., Zhang,J., Yang,G., Wu,H., Qu,D., Dong,J., Sun,L., Xue,Y., Zhao,A., Gao,Y., Zhu,J., Kan,B., Ding,K., Chen,S., Cheng,H., Yao,Z., He,B., Chen,R., Ma,D., Qiang,B., W, "Direct Submission", Submitted (26-AUG-2011) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
| DNA sequence : | |
ATGATGACGACCAGAATAGTGGTTGGCCTCACGGCAGGGACGTGTCTGATTTTCTCGCAAAACCTGATGGCCGAGGTCAG
TGTATTCAATCCGGCGCTTCTGGAAATCAACCATCAATCCGGAGTCGATATTCGCCAGTTTAATCGGGCAAACCTGATGC
CCCCAGGTGTTTATAGCGTTGATATTTTTATCAACGGTAAAATGTTTGAACGTCAGGATGTGACATTTGTTCAGGATAAT
CCAGATGCTGATCTGCACGCTTGCTTTATTGCCATTAAAAAAACACTGTCCTCCTTTGGCATAAAAGTTGATGCGCTCAA
ATCGTTCAATGATGTGGATGAGACGGTTTGCCTCGATCCTGCTCCACGTATTGAAGGCTCATCCTGGCAGTTTGACAGTG
ATAAATTGCAGCTGAATATATCCATTCACCAAATCTACATGGACGCGATGGCTTATGATTACATCAGCCCCACGCGTTGG
GATGAGGGGATTAATGCGCTCACCATCAACTACGATTTTTCTGGTTCACATACACTACGTTCAGATTATGGTTCACAAGA
GACAGATACCAGTTATCTCAATCTGCGCAATGGACTGAATATTGGACCGTGGCGGCTACGTAATTACAGTACTTTAAACA
CCAGCGATGGCCGTGCGGAATACAACTCCATTAGTACCTGGATACAGCGCGATATTGCCGCGTTAAGAAGCCAGATTATG
ATTGGTGATACGTGGACGGCGAGCGATATTTTCGACAGTACGCAAATTCGCGGCGCGCGTTTGTATACTGATAACGATAT
GCTACCCGCCAGCCAGAATGGCTTTGCTCCTGTGGTTCGTGGGATTGCAAAGTCCAACGCCACCGTCATCATTCGGCAGA
ATGGCTACGTGATTTATCAGTCAGCCGTTCCACAAGGTGCTTTTGAGATCACCGATCTCAACACCGCAAGTACAGGTGGC
GATTTGGACGTAACCATCAAAGAAGAAGACGGTAGCGAACAACGATTCACCCAACCTTATGCTTCATTGGCGATTCTTAA
ACGTGAAGGTCTGACAGATGTTGATGTCAGCGTGGGTGAATTGCGCGATGAAGACGGATTTACACCGGACGTCCTTCAGG
CGCAAATACTTCATGGTTTTTCCCACGGGATCACTTTATATGGAGGTATGCAGGCTGCTGAAAATTATGGTTCTGCAGCT
CTGGGTGTCGGTAAAGATCTTGGCGCTTTGGGCGCAATTTCTTTCGATGTGACACATGCTCGTGCGAATTTTAGCCATGA
TGATACAGAAACGGGTCAGTCATATCGCTTTCTCTATTCAAAACTATTTGACGACACAGACACTAGCTTGCGCCTGGTTG
GCTATCGTTACTCCACCGAGGGCTACTATACCCTCAATGAGTGGGCATCGCGGCGCAACAGCCCTGAAGACTTTTGGGAA
ACAGGTAACCGACGTAGTCGCGTGGAGGGAACGCTAACGCAGTCGTTGGGGAGAGATTATGGCAATTTATACCTGACATT
AAGCCGGCAACAATACTGGCATACCGATGATGTCGAACGATTAATGCAATTTGGCTACAGCAGTAGCTGGAAGCGTCTCT
CGTGGAACGTCTCCTGGAGTTATTCCAATACTGCCAGACAGGGGACGGGGAACAACCATGCCAGTGATAACACCAGTGAG
CAGATCTACATGCTCTCTTTATCTGTTCCTTTATCGGGCTGGTGGGGTAATAGTTACGCCACCTATTCTGTTTCGCAAAA
CGATAATTCCGGTAGCTCACATCAACTCGGACTCAGCGGTACGGCGCTGGAAAGAAATAACCTTTCATGGAATTTAATGC
AGTCCTATAACAGTCATGATGATGAGGTTGGCGGTAATATGTCCCTGACCTATGATGGCTCTTATGGCACGGTGAACGGC
AGCTATAACTACAGCCAAAATTCCCAGAGGCTGAATTATGGTATCAGAGGGGGAATTCTGGCACACAGCGAAGGGGTAAC
GTTAAGTCAGGAGTTAGGTGAAACTATTGCTCTTGTTAAAGCACCTGGGGCCGCCGGGTTAGAAATAGATAATATGCGCG
GTGCTGCGACGGACTGGCGCGGCTATACGGTCAAGACACAGCTAAACCCTTATGATGAAAATCGGGTAGCAATCAGCGAT
AACTATTTCTCGAAGTCGAATATAGAACTTGATAATACCGTCGTTACGATGGTTCCCACGCGTGGTGCAGTGGTTAAAGC
GGAGTTTGTGACTCATGTGGGTTATCGCGTTCTCTTCAGAGTGTTAAATGCAAATGGTAAACCGGTACCTTTTGGAGCCA
TTGCTGCGATACAAGATGCAAGTTTGGCAGATTCAGGAATTGTCGGTGACCGTGGCGAACTTTATCTTTCTGGTCTACCA
GAAAAAGGACAGGTTACGTTATCCTGGGGAGAAAACGCCTCAACAAAATGCATCTTCAATTATTCATTTTCGACACCAGA
AAGTGAGAGCGGATTAATTGAACAGGGTGTGACATGTCATTAA
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| Protein sequence : | |
MMTTRIVVGLTAGTCLIFSQNLMAEVSVFNPALLEINHQSGVDIRQFNRANLMPPGVYSVDIFINGKMFERQDVTFVQDN
PDADLHACFIAIKKTLSSFGIKVDALKSFNDVDETVCLDPAPRIEGSSWQFDSDKLQLNISIHQIYMDAMAYDYISPTRW
DEGINALTINYDFSGSHTLRSDYGSQETDTSYLNLRNGLNIGPWRLRNYSTLNTSDGRAEYNSISTWIQRDIAALRSQIM
IGDTWTASDIFDSTQIRGARLYTDNDMLPASQNGFAPVVRGIAKSNATVIIRQNGYVIYQSAVPQGAFEITDLNTASTGG
DLDVTIKEEDGSEQRFTQPYASLAILKREGLTDVDVSVGELRDEDGFTPDVLQAQILHGFSHGITLYGGMQAAENYGSAA
LGVGKDLGALGAISFDVTHARANFSHDDTETGQSYRFLYSKLFDDTDTSLRLVGYRYSTEGYYTLNEWASRRNSPEDFWE
TGNRRSRVEGTLTQSLGRDYGNLYLTLSRQQYWHTDDVERLMQFGYSSSWKRLSWNVSWSYSNTARQGTGNNHASDNTSE
QIYMLSLSVPLSGWWGNSYATYSVSQNDNSGSSHQLGLSGTALERNNLSWNLMQSYNSHDDEVGGNMSLTYDGSYGTVNG
SYNYSQNSQRLNYGIRGGILAHSEGVTLSQELGETIALVKAPGAAGLEIDNMRGAATDWRGYTVKTQLNPYDENRVAISD
NYFSKSNIELDNTVVTMVPTRGAVVKAEFVTHVGYRVLFRVLNANGKPVPFGAIAAIQDASLADSGIVGDRGELYLSGLP
EKGQVTLSWGENASTKCIFNYSFSTPESESGLIEQGVTCH
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