Name : ssaC (STM1394)
Accession : NP_460359.1
PAI name :
PAI accession : NC_003197_P2
Strain :
Virulence or Resistance: Virulence
Product : outer membrane secretin precursor
Function : -
Note : SpiA (gi|1498307); type III secretion system apparatus
Homologs in the searched genomes : 82 hits ( 82 protein-level )
Publication :
-McClelland,M., Sanderson,K.E., Spieth,J., Clifton,S.W., Latreille,P., Courtney,L., Porwollik,S., Ali,J., Dante,M., Du,F., Hou,S., Layman,D., Leonard,S., Nguyen,C., Scott,K., Holmes,A., Grewal,N., Mulvaney,E., Ryan,E., Sun,H., Florea,L., Miller,W., Stoneki, "Complete genome sequence of Salmonella enterica serovar Typhimurium LT2", Nature 413 (6858), 852-856 (2001) PUBMED 11677609.
-McClelland,M., Sanderson,K.E., Spieth,J., Clifton,S.W., Latreille,P., Courtney,L., Porwollik,S., Ali,J., Dante,M., Du,F., Hou,S., Layman,D., Leonard,S., Nguyen,C., Scott,K., Holmes,A., Grewal,N., Mulvaney,E., Ryan,E., Sun,H., Florea,L., Miller,W., Stoneki, "Direct Submission", Submitted (10-SEP-2004) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
-McClelland,M., Sanderson,K.E., Spieth,J., Clifton,S.W., Latreille,P., Courtney,L., Porwollik,S., Ali,J., Dante,M., Du,F., Hou,S., Layman,D., Leonard,S., Nguyen,C., Scott,K., Holmes,A., Grewal,N., Mulvaney,E., Ryan,E., Sun,H., Florea,L., Miller,W., Stoneki, "Direct Submission", Submitted (06-NOV-2001) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
| DNA sequence : | |
ATGGTAGTAAATAAACGTTTAATCTTAATTTTACTATTTATACTCAATACAGCAAAGAGTGATGAGTTATCATGGAAAGG
TAATGACTTCACCCTTTATGCCAGACAAATGCCATTAGCAGAGGTTTTACATCTGCTCTCAGAGAACTATGATACGGCTA
TTACTATTAGCCCATTGATAACAGCTACATTTAGTGGAAAAATTCCGCCTGGACCACCGGTCGATATTTTGAATAACCTG
GCAGCACAATATGATTTGCTTACCTGGTTTGATGGCAGCATGTTATATGTATATCCTGCATCGTTATTAAAACATCAGGT
TATCACTTTCAATATTTTATCTACTGGACGGTTCATTCATTACTTACGCAGCCAGAATATCCTTTCATCACCGGGATGCG
AGGTTAAAGAAATTACCGGTACCAAAGCTGTGGAGGTGAGCGGTGTTCCCAGCTGCCTGACTCGTATTAGTCAATTAGCT
TCAGTGCTGGATAATGCGTTAATCAAACGAAAAGACAGTGCGGTGAGTGTAAGTATATACACGCTTAAGTATGCCACTGC
GATGGATACCCAGTACCAATATCGCGATCAGTCCGTCGTGGTTCCAGGGGTCGTTAGTGTATTGCGTGAGATGAGTAAAA
CCAGCGTCCCGACGTCATCGACGAACAATGGTTCACCCGCTACACAGGCATTGCCCATGTTTGCTGCCGACCCACGCCAG
AATGCAGTGATCGTTCGTGATTATGCGGCCAATATGGCCGGGTATCGGAAACTCATCACAGAATTAGATCAACGCCAGCA
GATGATAGAGATTTCGGTGAAAATTATCGATGTTAATGCTGGAGATATTAACCAGTTAGGCATCGACTGGGGAACGGCAG
TGTCGCTGGGTGGCAAGAAAATTGCGTTCAATACAGGTTTGAATGACGGTGGTGCTAGTGGTTTTTCAACGGTAATCAGC
GATACCTCAAACTTTATGGTGCGTCTGAATGCCCTGGAAAAAAGCTCTCAGGCTTATGTACTTTCCCAGCCATCTGTGGT
GACTTTAAATAATATCCAGGCTGTGCTGGATAAAAATATTACTTTCTATACCAAACTGCAGGGAGAAAAAGTGGCTAAAC
TTGAATCCATCACTACGGGTTCTTTGTTACGCGTTACACCTCGCTTGTTAAATGACAATGGCACGCAAAAAATAATGCTT
AATCTTAATATTCAGGATGGACAACAAAGTGATACGCAAAGCGAAACAGACCCGCTGCCCGAAGTGCAAAATTCTGAAAT
TGCTTCGCAAGCCACATTATTGGCCGGGCAAAGTCTATTGCTGGGAGGGTTTAAACAAGGTAAACAAATCCACTCGCAAA
ACAAAATCCCTTTATTGGGCGATATTCCTGTTGTAGGTCATTTGTTTCGCAATGATACGACTCAAGTACATAGTGTAATC
AGGCTTTTTTTGATTAAAGCCTCAGTAGTAAATAATGGCATATCTCATGGTTAA
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| Protein sequence : | |
MVVNKRLILILLFILNTAKSDELSWKGNDFTLYARQMPLAEVLHLLSENYDTAITISPLITATFSGKIPPGPPVDILNNL
AAQYDLLTWFDGSMLYVYPASLLKHQVITFNILSTGRFIHYLRSQNILSSPGCEVKEITGTKAVEVSGVPSCLTRISQLA
SVLDNALIKRKDSAVSVSIYTLKYATAMDTQYQYRDQSVVVPGVVSVLREMSKTSVPTSSTNNGSPATQALPMFAADPRQ
NAVIVRDYAANMAGYRKLITELDQRQQMIEISVKIIDVNAGDINQLGIDWGTAVSLGGKKIAFNTGLNDGGASGFSTVIS
DTSNFMVRLNALEKSSQAYVLSQPSVVTLNNIQAVLDKNITFYTKLQGEKVAKLESITTGSLLRVTPRLLNDNGTQKIML
NLNIQDGQQSDTQSETDPLPEVQNSEIASQATLLAGQSLLLGGFKQGKQIHSQNKIPLLGDIPVVGHLFRNDTTQVHSVI
RLFLIKASVVNNGISHG
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