PAI Gene Information


Name : int
Accession : NP_458757.1
PAI name : SPI-7
PAI accession : NC_003198_P9
Strain : Salmonella enterica RSK2980
Virulence or Resistance: Not determined
Product : integrase (fragment)
Function : -
Note : Protein sequence is in conflict with the conceptual translation; Gene remnant with strong similarities to the C-termini of several integrases e.g. Escherichia coli integrase Int TR:Q9RM38 (EMBL:AJ245585) (304 aa) fasta scores: E(): 3.1e-20, 75.4% id in 65
Homologs in the searched genomes :   13 hits    ( 12 protein-level,   1 DNA-level )  
Publication :
    -Parkhill,J., "Direct Submission", Submitted (25-OCT-2001) Submitted on behalf of the Salmonalla sequencing team, Sanger Centre, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, UK.

    -Parkhill,J., Dougan,G., James,K.D., Thomson,N.R., Pickard,D., Wain,J., Churcher,C., Mungall,K.L., Bentley,S.D., Holden,M.T., Sebaihia,M., Baker,S., Basham,D., Brooks,K., Chillingworth,T., Connerton,P., Cronin,A., Davis,P., Davies,R.M., Dowd,L., White,N., , "Complete genome sequence of a multiple drug resistant Salmonella enterica serovar Typhi CT18", Nature 413 (6858), 848-852 (2001) PUBMED 11677608.

    -Parkhill,J., Dougan,G., James,K.D., Thomson,N.R., Pickard,D., Wain,J., Churcher,C., Mungall,K.L., Bentley,S.D., Holden,M.T., Sebaihia,M., Baker,S., Basham,D., Brooks,K., Chillingworth,T., Connerton,P., Cronin,A., Davis,P., Davies,R.M., Dowd,L., White,N., , "Direct Submission", Submitted (10-SEP-2013) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.


DNA sequence : 
AGATCGGGTGGTTACGACACCAAAACCGAAGTCTGTGGTCATGGCTTCCGCACAATGGCCTGTAGCGCCCTGAACGAGTC
TGCGCTGTGGTCTAAGGACGCCATCGAGCGCCAGATGAGCCACAAGGAGCGCAACGGCGTGCGTGCGGCATATGTACATA
AAGCGGAGCATCTGGAAGCGCGTATGGAGATGATGCAGTGGTGGTCGGATTATCTCGACATGAGCCGCGAGGGGTACGTT
GCGCCCTATATTTATGCGCAGCGGCATAAGGCGGCCTGA

Protein sequence : 
RSGGYDTKTEVCGHGFRTMACSALNESALWSKDAIERQMSHKERNGVRAAYVHKAEHLEARMEMMQWWSDYLDMSREGYV
APYIYAQRHKAA