PAI Gene Information


Name : cII
Accession : NP_458752.1
PAI name : SPI-7
PAI accession : NC_003198_P9
Strain : Salmonella enterica RSK2980
Virulence or Resistance: Not determined
Product : transcriptional regulatory protein
Function : -
Note : Similar to Bacteriophage Mu negative regulatory DNA-binding protein Ner or cII SW:DBNE_BPMU (P06020) (74 aa) fasta scores: E(): 1.2e-15, 66.2% id in 68 aa and to Escherichia coli ner-like protein Nlp SW:NLP_ECOLI (P18837) (92 aa) fasta scores: E(): 1.1e-1
Homologs in the searched genomes :   389 hits    ( 389 protein-level )  
Publication :
    -Parkhill,J., "Direct Submission", Submitted (25-OCT-2001) Submitted on behalf of the Salmonalla sequencing team, Sanger Centre, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, UK.

    -Parkhill,J., Dougan,G., James,K.D., Thomson,N.R., Pickard,D., Wain,J., Churcher,C., Mungall,K.L., Bentley,S.D., Holden,M.T., Sebaihia,M., Baker,S., Basham,D., Brooks,K., Chillingworth,T., Connerton,P., Cronin,A., Davis,P., Davies,R.M., Dowd,L., White,N., , "Complete genome sequence of a multiple drug resistant Salmonella enterica serovar Typhi CT18", Nature 413 (6858), 848-852 (2001) PUBMED 11677608.

    -Parkhill,J., Dougan,G., James,K.D., Thomson,N.R., Pickard,D., Wain,J., Churcher,C., Mungall,K.L., Bentley,S.D., Holden,M.T., Sebaihia,M., Baker,S., Basham,D., Brooks,K., Chillingworth,T., Connerton,P., Cronin,A., Davis,P., Davies,R.M., Dowd,L., White,N., , "Direct Submission", Submitted (10-SEP-2013) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.


DNA sequence : 
ATGACGCAACAGGACTGGCATCCCGCCGACATTATCGCGGGGTTGAGAAAACGGGGCACCTCGCTGGCGGCGCTGTCCCG
TCAGTCGGGGCTGGCGTCCTCAACGCTGGCAAATGCGCTGATAAGGCACTGGCCCAAAGGCGAAAGGCTGATTGCCGAAG
CGTTGGGTATTGCGCCAGAGCAAATCTGGCCTTCCCACTACCGCAAGCCTGAAAATTACTAA

Protein sequence : 
MTQQDWHPADIIAGLRKRGTSLAALSRQSGLASSTLANALIRHWPKGERLIAEALGIAPEQIWPSHYRKPENY