Name : STY4635
Accession : NP_458715.1
PAI name : SPI-7
PAI accession : NC_003198_P9
Strain : Salmonella enterica RSK2980
Virulence or Resistance: Not determined
Product : conserved hypothetical protein
Function : -
Note : Similar to Escherichia coli retron EC67 hypothetical 53.2 kDa protein SW:YR72_ECOLI (P21312) (467 aa) fasta scores: E(): 0, 82.9% id in 404 aa, and to Bacteriophage 186 replication gene A protein SW:VPA_BP186 (P41064) (694 aa) fasta scores: E(): 0, 35.7%
Homologs in the searched genomes : 71 hits ( 69 protein-level, 2 DNA-level )
Publication :
-Parkhill,J., "Direct Submission", Submitted (25-OCT-2001) Submitted on behalf of the Salmonalla sequencing team, Sanger Centre, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, UK.
-Parkhill,J., Dougan,G., James,K.D., Thomson,N.R., Pickard,D., Wain,J., Churcher,C., Mungall,K.L., Bentley,S.D., Holden,M.T., Sebaihia,M., Baker,S., Basham,D., Brooks,K., Chillingworth,T., Connerton,P., Cronin,A., Davis,P., Davies,R.M., Dowd,L., White,N., , "Complete genome sequence of a multiple drug resistant Salmonella enterica serovar Typhi CT18", Nature 413 (6858), 848-852 (2001) PUBMED 11677608.
-Parkhill,J., Dougan,G., James,K.D., Thomson,N.R., Pickard,D., Wain,J., Churcher,C., Mungall,K.L., Bentley,S.D., Holden,M.T., Sebaihia,M., Baker,S., Basham,D., Brooks,K., Chillingworth,T., Connerton,P., Cronin,A., Davis,P., Davies,R.M., Dowd,L., White,N., , "Direct Submission", Submitted (10-SEP-2013) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
| DNA sequence : | |
GTGGCAGTGAGTAAAATCACATTACATTATGCACAAACCACCGGCGGCTCGAATGAGGCCGCCGCAGCCTTTCCATGGAA
TACCCCAAAAAAAGCGGTTAACCCGTATCTGGACCCGGCGGAATTTGCGCCGGAGTCTGCGCTTTCAAACCTGATCGCTC
TTTACGCTGTGGATAACGAGCAGGAGCAGTTGCGCCGTGAGACGCTGAGCGATGAGGTCTGGGAGCGCTATTTCTTCAAT
GAATCCCGTGATCCTGTCCAGCGTGAAATGGAGCAGGATCGGCTGATTAACCATGCCAAAACGGCGCGCGAGCAGCAGCG
TTTTAATCCCGATCTGGTCATTATTGCCAACGTGGGCGCCCAACCGGCGCATATCAGCAAGCCTCTGCTGGAGCGGATTA
AATATTTCCATAGTCTGGGCAGAGCAAAAGCTTATTCCCGCTACCTGCAAAAAACAATCAGGCCGTGTCTTGAGCGGCTG
GAGCGCGTGCGCGACAGTCAGGTATCTGCCTCTTTCCGGTTCATGGCGAGTCATGACGGGCTGGAGGGGCTGCTGGTACT
CCCTGAAATGAATCAGGATCAGGTTAAACGCCTATCCACGCTGGTTGCGGCACATATGAGCATGTGTCTTGATGCAGCCT
GCGGTGATCTGTTTGTCAGTGATGATGTTAAACCAGAAGAAATTCGTCAGGCATGGGAAAGGGTTGCTGCAGAGGCCATG
CGCCTTGAGGTCATCCCGCCTGCGTTTGAGCAGTTGCGCCGCAAAAAGCGCCGCCGTAAGCCGGTGCCTTATGAACTGAT
CCCACCGTCGCTGGCCCGTATGCTGTGCGCGGACTGGTGGTATCGCAAATTGTGGCAGATGCGCTGCGAGTGGCGGGAGG
AGCAGTTGCGCGCCGTCTGCCTGGTCAACAAGAAAGCCTCACCGTATGTCAGCTACGAAGCCGTGATCCACAAACGCGAG
CAGCGCCGCAAATCGCTGGAGTTCTTCCGCTCGCATGAGCTGATCAACGAAGACGGCGACACGCTGGACATGGAAGACGT
GGTGAACGCCAGCAACAGCAACCCGGCGCACCGCCGTAATGAAATGATGGCCTGTGTTAAGGGGCTGGAGCTGATCGCGG
AAATGCGCGGAGACTGCGCGGTGTTTTATACCATCACCTGCCCGTCACGCTTCCACGCAACCCTCAACAACGGCAGGCCT
AATCCGAAGTGGACCAGTGCCACTGTCCGGCAGAGCAGTGACTATCTGGTTGATACGTTCGCCGCTTTCCGCAAGGCAAT
GCACAAGGCCGGGCTGCGCTGGTATGGCGTCCGCGTTGCAGAGCCGCACCATGACGGCACCGTGCACTGGCATCTTCTGT
GCTTCATGCGCAAAAAAGACCGCCGTTCCATCACCGCGCTGTTGCGTAAGTTTGCCATCCGTGAAGACCGCGAGGAGCTG
GGCGCCAATACCGGGCCGCGCTTCAAGCCCGAGCTAATCAACCCGCGCAAGGGTACGCCGACAAGCTACATCGCCAAATA
CATCAGCAAGAACATCGACGGGCGCGGGCTGGCTAAAGAAATCAGCAAAGAAACCGGCAGATCACTGCGTGACAGCGCCG
AGCATGTCAGCGCCTGGGCGTCACTGCATCGTGTCCAGCAGTTCCGTTTCTTTGGTATTCCGGGGCGTCAGGCATACCGC
GAGCTGCGCTTGCTGGCTGGTCAGGCGGCGAGAGTGCAGGGCGAACGCAAAGCGGGTGCGCCGGTACTGGATAATCCGCG
TCTGGATGCGGTACTGGCGGCGGCTGATGCGGGCTGCTTTGCCACCTATATCATGAAGCAGGGCGGTGTGCTGGTTCCCC
GCAAACATCACCTTGTCCGCACGGCATATGAGCTTAACGATGAGCCGAGCGCCTACGGCGATCACGGTATCCGTATATAT
GGCATCTGGTCCCCGATTGCGGAGGGCAAGATTTGCACGCACGCGGTGAAGTGGAAAAAGGTTCGTAAAGCCGTTGACGT
TCAGGAGGCGGCAGCCGACCAGGGCGCTTGCGCCCCTTGGACTCGGACTCGGACTCGTGGCAATAACTGTCCCCCTGTTG
AAAATCTGAACAAATCAGGGGGTGATTTACCCGATATTAAAACCATGAATGAGAAGGAACTGCAGGATTATCTCCACAAT
ATGGGCCAGAAGGAACGGCGGGAACTTACAGCCAGGTTGAGACTGGTAAAACCGAAGCGGAAAACAGTATACAAACAGAA
TATTTCGGAGCAGCAACGCCTGCAGCTTGAGGCAGAACTGACAGCCAGAGGGTTTGAAGGTAGTGCATCTGAGATTGATT
TGCTTCTGCGTGGTGGCAGCATTCCGTCAGGTGCCGGGCTACGGATTTTTTACCGCAACCATCGACTGCAGGAAGATGAC
AAATGGCGTCAGTGA
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| Protein sequence : | |
MAVSKITLHYAQTTGGSNEAAAAFPWNTPKKAVNPYLDPAEFAPESALSNLIALYAVDNEQEQLRRETLSDEVWERYFFN
ESRDPVQREMEQDRLINHAKTAREQQRFNPDLVIIANVGAQPAHISKPLLERIKYFHSLGRAKAYSRYLQKTIRPCLERL
ERVRDSQVSASFRFMASHDGLEGLLVLPEMNQDQVKRLSTLVAAHMSMCLDAACGDLFVSDDVKPEEIRQAWERVAAEAM
RLEVIPPAFEQLRRKKRRRKPVPYELIPPSLARMLCADWWYRKLWQMRCEWREEQLRAVCLVNKKASPYVSYEAVIHKRE
QRRKSLEFFRSHELINEDGDTLDMEDVVNASNSNPAHRRNEMMACVKGLELIAEMRGDCAVFYTITCPSRFHATLNNGRP
NPKWTSATVRQSSDYLVDTFAAFRKAMHKAGLRWYGVRVAEPHHDGTVHWHLLCFMRKKDRRSITALLRKFAIREDREEL
GANTGPRFKPELINPRKGTPTSYIAKYISKNIDGRGLAKEISKETGRSLRDSAEHVSAWASLHRVQQFRFFGIPGRQAYR
ELRLLAGQAARVQGERKAGAPVLDNPRLDAVLAAADAGCFATYIMKQGGVLVPRKHHLVRTAYELNDEPSAYGDHGIRIY
GIWSPIAEGKICTHAVKWKKVRKAVDVQEAAADQGACAPWTRTRTRGNNCPPVENLNKSGGDLPDIKTMNEKELQDYLHN
MGQKERRELTARLRLVKPKRKTVYKQNISEQQRLQLEAELTARGFEGSASEIDLLLRGGSIPSGAGLRIFYRNHRLQEDD
KWRQ
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