Name : STY4611
Accession : NP_458693.1
PAI name : SPI-7
PAI accession : NC_003198_P9
Strain : Salmonella enterica RSK2980
Virulence or Resistance: Not determined
Product : probable phage tail fibre protein
Function : -
Note : Similar to Bacteriophage P2 probable tail fiber protein SW:VPH_BPP2 () (669 aa) fasta scores: E(): 7.1e-29, 37.6% id in 569 aa
Homologs in the searched genomes : 13 hits ( 13 protein-level )
Publication :
-Parkhill,J., "Direct Submission", Submitted (25-OCT-2001) Submitted on behalf of the Salmonalla sequencing team, Sanger Centre, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, UK.
-Parkhill,J., Dougan,G., James,K.D., Thomson,N.R., Pickard,D., Wain,J., Churcher,C., Mungall,K.L., Bentley,S.D., Holden,M.T., Sebaihia,M., Baker,S., Basham,D., Brooks,K., Chillingworth,T., Connerton,P., Cronin,A., Davis,P., Davies,R.M., Dowd,L., White,N., , "Complete genome sequence of a multiple drug resistant Salmonella enterica serovar Typhi CT18", Nature 413 (6858), 848-852 (2001) PUBMED 11677608.
-Parkhill,J., Dougan,G., James,K.D., Thomson,N.R., Pickard,D., Wain,J., Churcher,C., Mungall,K.L., Bentley,S.D., Holden,M.T., Sebaihia,M., Baker,S., Basham,D., Brooks,K., Chillingworth,T., Connerton,P., Cronin,A., Davis,P., Davies,R.M., Dowd,L., White,N., , "Direct Submission", Submitted (10-SEP-2013) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
| DNA sequence : | |
ATGAGCACAAAATTTTATACCCTGCTGACGGATATTGGCGCGGCAAAACTTGCCAGCGCCGCCGCGCTCGGTGTGCCGCT
AAAAATTACCCATATGGCGGTGGGCGATGGCGGCGGAGTATTGCCAACGCCGGACGCAAAGCAGACGGCACTGGTAAATG
AGAAACGCCGGGCTGCGCTGAATATGCTTTATATCGACCCGCAGAACAGTAGCCAGATTATTGCTGAGCAGGTAATCCCG
GAAACTGAGGGCGGGTGGTGGATTCGTGAAGTTGGCCTGTTTGATGAAACCGGTGCGCTGATCGCTGTGGGTAACTGCCC
TGAGAGCTACAAGCCGCAGCTGACAGAAGGGAGCGGACGTACGCAGACCGTGCGCATGGTACTGATTACCAGCAGCACCG
ATAACATCACCCTGAAAATTGACCCTGCAGTAGTGCTGGCAACCCGTAAATATGTAGATGATAAGGCGCTGGAGCTGAAG
GTATATGTAGACGACCTGATGGCAAAGCATCTTGCTGCGCCGGACCCGCATTCACAGTATGCGCAGAAGGACAGCCCGAC
ACTCACAGGGATTCCAAAGGTACCGACGCCAGCGGCGGGTAACAGCACTAAACAGATTGCGAACACGGAATTTGTGGCAT
CGTCTATTGCGGCAATGGTGGATTCTGCGCCTGCAGCACTGGATACGCTGAACGAGCTGGCAGCGGCTCTGGGGAATGAC
CCGAATTTTGCCACAACGATGTTAAACGCTCTTGGTGGAAAGCAGCCGCTGGACAATACGCTGACGAATTTAAGCGGAAA
AGATGTCGCCGGCCTTCTCGCATACTTCGGTTTAGGAGAAACGATAAATCGTGCCGCCGATGCGCTACAAAAATCACAGA
ACGGTGCAGACATTCCTGACAAGCCGCGGTTTGTACAAAATATCGGTTTAAAAGAAACCCTGAACCCGACAAAACGCGTG
AGTATAGGCAATATCGGAACCGGCGTTTTTGACGGCAGCACACCGTGTATAAATATCGGTGACAGTGACAGTGGATTTAT
CGGCAGCGCGGATGGCGTACTGGATATTTACTGTAACGGTGCCAAAGTGGGTTATATCAATGGTAACGGATTACACATGC
TCACTGATATTCATTTCGATAATGCGAGCATGACCACTAATGGTGACATTTTTAGTTCAGTGTGGGGGGATAACTGGCTG
AGTATCTGGATTACTAATCAGCTAAATACCCGTGGAACGATTGACTGGATCAATAGTGAACTGGCAATTCGTGACAACAA
CATCAACACCCGCGCCACCATTGATTATGTTAACCAGACTTTCGCCCGTAAAAATACCGGCAGCATTCAGGACTGGGGCT
GGATTCTGGACGACAGCACCGGATTTATAATGCAGTGGGGAACACTTGGTAACTCAAACGGAACCTACAATTTCCCGCGC
GCTTTCCCTGTTGGTTGCTTTGCCGTTTTTGTAACCAATACCAACGCTCAGGGCACCCAGGTGGATAACGCATTCGGATA
CCCGGTGAGCAACAGTCAGTTTTTTGCCGCCACCAAGTCATCAGGAATGGCCAATCTGGTCAATAATTTTCCTGTAGCCT
GGTTTGCGATTGGGAGATAA
|
| Protein sequence : | |
MSTKFYTLLTDIGAAKLASAAALGVPLKITHMAVGDGGGVLPTPDAKQTALVNEKRRAALNMLYIDPQNSSQIIAEQVIP
ETEGGWWIREVGLFDETGALIAVGNCPESYKPQLTEGSGRTQTVRMVLITSSTDNITLKIDPAVVLATRKYVDDKALELK
VYVDDLMAKHLAAPDPHSQYAQKDSPTLTGIPKVPTPAAGNSTKQIANTEFVASSIAAMVDSAPAALDTLNELAAALGND
PNFATTMLNALGGKQPLDNTLTNLSGKDVAGLLAYFGLGETINRAADALQKSQNGADIPDKPRFVQNIGLKETLNPTKRV
SIGNIGTGVFDGSTPCINIGDSDSGFIGSADGVLDIYCNGAKVGYINGNGLHMLTDIHFDNASMTTNGDIFSSVWGDNWL
SIWITNQLNTRGTIDWINSELAIRDNNINTRATIDYVNQTFARKNTGSIQDWGWILDDSTGFIMQWGTLGNSNGTYNFPR
AFPVGCFAVFVTNTNAQGTQVDNAFGYPVSNSQFFAATKSSGMANLVNNFPVAWFAIGR
|
|
