Name : samB
Accession : NP_458681.1
PAI name : SPI-7
PAI accession : NC_003198_P9
Strain : Salmonella enterica RSK2980
Virulence or Resistance: Not determined
Product : UV protection protein
Function : -
Note : Similar to Salmonella typhimurium cryptic 60-MDa plasmid SamB protein SW:SAMB_SALTY (P23832) (424 aa) fasta scores: E(): 0, 89.6% id in 423 aa, and to Shigella flexneri ImpB impB TR:Q9ZA91 (EMBL:AF079316) (423 aa) fasta scores: E(): 0, 71.7% id in 421 aa;
Homologs in the searched genomes : 439 hits ( 439 protein-level )
Publication :
-Parkhill,J., "Direct Submission", Submitted (25-OCT-2001) Submitted on behalf of the Salmonalla sequencing team, Sanger Centre, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, UK.
-Parkhill,J., Dougan,G., James,K.D., Thomson,N.R., Pickard,D., Wain,J., Churcher,C., Mungall,K.L., Bentley,S.D., Holden,M.T., Sebaihia,M., Baker,S., Basham,D., Brooks,K., Chillingworth,T., Connerton,P., Cronin,A., Davis,P., Davies,R.M., Dowd,L., White,N., , "Complete genome sequence of a multiple drug resistant Salmonella enterica serovar Typhi CT18", Nature 413 (6858), 848-852 (2001) PUBMED 11677608.
-Parkhill,J., Dougan,G., James,K.D., Thomson,N.R., Pickard,D., Wain,J., Churcher,C., Mungall,K.L., Bentley,S.D., Holden,M.T., Sebaihia,M., Baker,S., Basham,D., Brooks,K., Chillingworth,T., Connerton,P., Cronin,A., Davis,P., Davies,R.M., Dowd,L., White,N., , "Direct Submission", Submitted (10-SEP-2013) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
| DNA sequence : | |
ATGTTCGCCCTGGCTGACGTCAACAGCTTCTACGCGAGCTGTGAAAAAGTATTTCGTCCCGATTTACGTAATACACCTGT
TGTGGTGCTCAGTAACAACGATGGATGTGTTATCGCGCGTTCAAAAGAAGCGAAGCAACTGGGCATTAAAATGGGGGTTC
CGTGGTTTCAACTGAAAACAACCGAATTTCCTGTACCTGTCGTTGCGTTCTCGAGTAACTACGAACTCTACGCGTCGATG
TCGAACCGTGTTATGGCGCATCTCGAAGAACTGGCACCTCGCGTTGAGCAGTATTCTATCGACGAAATGTTTCTTGATGT
GCGCAATATTGACAGTTGTATCGATTTTGAAGACTTCGGCCGGCAGTTGCGCGAGCATGTACATTCAGGAACCGGACTGA
CCATCGGAGTTGGGATGGGACCGACCAAGACACTGGCAAAAAGCGCACAATGGGCGTCTAAGGAATGGCGGCAGTTTGAG
GGCGTGCTTGCTCTGACTTCAGGCAATCCAAAGCGAACGGAGAAACTATTGTCACTGCAGCCAGTAGACGAAATCTGGGG
GGTTGGTCGCCGGATCTCGAAGAAACTGCACACAATGGGGATAACAACTGCACTGCAGCTGGCGCGCGCGAACCCAACAT
TTATCAGGAAAAATTTCAGTGTTGTTCTCGAGAGAACTGTCCGTGAACTGAACGGGGAAAGCTGTATTTCACTGGAGGAG
GCTCCGCCACCCAAGCAGCAGATTGTCTGCAGCCGATCCTTTGGGGAGCGCGTCACAACATATGAAGCCATGCGCCAGGC
AGTCTGTCAGTATGCTGAGCGTGCAGCTGAAAAGCTGCGCGGCGAGCGGCAATTCTGCAGACATGTTGCTGTATTTGTGA
AGACGTCACCGTTCGCTGTGAACGAACCGTATTACGGGAATGTGGCCAGTGAGAAACTGACGACTCCCACGCAGGATACC
AGGGACATCATAGCCGCAGCGGTGAAAGCACTGGATCGGATCTGGGTGAAAGGGCATAGATATGCAAAAGCGGGTTGCAT
GCTCAATGATTTCACACCAACCGGGATTTCTCAGTTAAATCTTTTTGATGAAGTGCAGCCGCACGAACGAAGTGAGCAGT
TGATGAAAGTTCTCGACAGTATCAACCATTCAGGTATGGGAAAAGTGTGGTTTGCCGGAAGAGGGATAGCCCCTGAGTGG
CAGATGAAAAGAGAGCTACTCTCTCCAGCTTATACCACTCGCTGGGCTGAATTACCTGTTGCACGATTGCGCTGA
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| Protein sequence : | |
MFALADVNSFYASCEKVFRPDLRNTPVVVLSNNDGCVIARSKEAKQLGIKMGVPWFQLKTTEFPVPVVAFSSNYELYASM
SNRVMAHLEELAPRVEQYSIDEMFLDVRNIDSCIDFEDFGRQLREHVHSGTGLTIGVGMGPTKTLAKSAQWASKEWRQFE
GVLALTSGNPKRTEKLLSLQPVDEIWGVGRRISKKLHTMGITTALQLARANPTFIRKNFSVVLERTVRELNGESCISLEE
APPPKQQIVCSRSFGERVTTYEAMRQAVCQYAERAAEKLRGERQFCRHVAVFVKTSPFAVNEPYYGNVASEKLTTPTQDT
RDIIAAAVKALDRIWVKGHRYAKAGCMLNDFTPTGISQLNLFDEVQPHERSEQLMKVLDSINHSGMGKVWFAGRGIAPEW
QMKRELLSPAYTTRWAELPVARLR
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