Name : STY4573
Accession : NP_458658.1
PAI name : SPI-7
PAI accession : NC_003198_P9
Strain : Salmonella enterica RSK2980
Virulence or Resistance: Not determined
Product : hypothetical protein
Function : -
Note : Weakly similar in parts to Helicobacter pylori J99 DNA transfer protein virb4_2 TR:Q9ZKL8 (EMBL:AE001521) (475 aa) fasta scores: E(): 0.28, 18.6% id in 354 aa
Homologs in the searched genomes : 144 hits ( 142 protein-level, 2 DNA-level )
Publication :
-Parkhill,J., "Direct Submission", Submitted (25-OCT-2001) Submitted on behalf of the Salmonalla sequencing team, Sanger Centre, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, UK.
-Parkhill,J., Dougan,G., James,K.D., Thomson,N.R., Pickard,D., Wain,J., Churcher,C., Mungall,K.L., Bentley,S.D., Holden,M.T., Sebaihia,M., Baker,S., Basham,D., Brooks,K., Chillingworth,T., Connerton,P., Cronin,A., Davis,P., Davies,R.M., Dowd,L., White,N., , "Complete genome sequence of a multiple drug resistant Salmonella enterica serovar Typhi CT18", Nature 413 (6858), 848-852 (2001) PUBMED 11677608.
-Parkhill,J., Dougan,G., James,K.D., Thomson,N.R., Pickard,D., Wain,J., Churcher,C., Mungall,K.L., Bentley,S.D., Holden,M.T., Sebaihia,M., Baker,S., Basham,D., Brooks,K., Chillingworth,T., Connerton,P., Cronin,A., Davis,P., Davies,R.M., Dowd,L., White,N., , "Direct Submission", Submitted (10-SEP-2013) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
| DNA sequence : | |
ATGAATCGGTTAGCCAGTTACATCAAACCGCATGCTCAGAGGACGGCATTTACGAAGGCCTGGCTGGCTGAAACAGAACA
GCATCTGCGAAATATCACCCGGCCGGAAGGTTTGTTCACTGATTCACTTGTCACCGGGGTTCCCTGGCGGGGACAAAATC
GTTCCGTCAGGATGGTGGTATATCGATACCTGCCAGCGAATTACAAAGATGATTCGCCGGTTGCCGCTCTCAACCAGGTT
TGTGAGCGCCTGACTTCAGCCTTATCTGCAGCCGGCGTTCTGAGTGTCCGACAGAATGGCGAGCAGATACATCGATGGTT
GTTACGTCACTTCAATCCTGAGCCCGACTGGATAGACAAAGATACGCTTTACCGGGAGGCTCGTTATTATGATGATGCAC
CTGATTCATTGCCTCTTGGCAATGATTTCACTGAGACGTTGTGGTTTAACCCTCCACGTTCTGATACCCGAAATGGTGTG
TGGTGGTTTGATAATGTGGCGCATCGTGCCGTTCCTGTTGAAACATTACGTCGCCCTCCGGGACCCGGTCATCTGACGGG
GGAGGTTAAGCGTGGCGACAATATTAATACTCTGATGGATTTATTGCCTGAGGGCACAATGGTATCGCTCACTATTGTGG
CGCAGGCTCAGGACACGCTGGAAGCCGGGTTTGACACGCTGGGTAAAAATGCAATAGGGCAGAACACGGAATCCAGGCGG
ACCCGTAGTGATGTGGAGCAGGTGAAGAGTTTGCTGGGCATGCGTCACAAACTTTATCGTGCATCGATAACTTTTTTGAT
GCGTGCACCTGATGTCAGTGAGCTGAATAAAAAAATACAGCAACTTACCGCTACATTGCTGACTGCGGGGCTCCAGCCCA
CGAAACCTGAATACGAAGTGGCGCCCCTGAATGACTATTTGCGAGCGCTTCCTATGTGTTTTAACCCGCAACTGGATAAA
AAAAACTGGTATACCCGCCTGACCTGGGTTCAGCATCTGGCTGGATTGCTTCCCGTGACCGGTCGCAGCCAGGGAACCGG
ACACCCCGGGTTTAGTTTTTTTAACCGTGGCGGAGAACTGTTGTCTTTTGATCCCTTAAATAGTCTGGACAGAACGCAGA
ATGCTCACCTGTTGCTTTTTGGTCCGACCGGGGCGGGTAAATCAGCCACCTTATGTAGTGCGTTATCACAGTTAATGGCC
GTTCATCGTCCACGCCTCTTTATTGCCGAAGCCGGCAACAGTTTTGGTTTGCTGGCGGAGTATTTCCGGGGGCTGGGACT
GAGCGTAAATGTACTGAGTATCAAACCTGGCTGCGGTATTTCTTTACCGATGTTTGCTGATGCTCATTCCTTAATGCGAG
TAGATCCAAAGAAAAACGTGGTTTCTGAGGAAGCTCTACCTGAGCTGGAGCCAGCCAATACCGACAGCGCAGAAGATGAA
AGTGAAGAGCGTGACATTCTTGGCGAAATGGAAATTGCAGCCCGGATGATGATCACCGGTGGCGAGAAGCGGGAGGAGGA
ACGTCTTACCCGGGCTGACCGCGGTCTTATTCGTGAAGCTATCATGATGGCGGCGGAGAAAACATATCAGGACGGACATC
AGATGCTGGCTGAGGATTTACAGGCTGCCCTGTGGAATATCTCACGTGATAATTCCATTGGTGCAAATGGCGAGCCTATG
CGGAATCAGTCCCGTCGCGATCGTGCTGCTGAGATGGCAGAAGCCATGGCCATGTTCACTCAGGGATTTGAGGGAGAGTT
ATTCAACCGTCCGGGAACACCATGGCCAGAGGCTGATGTCACACTGATCGATTTAGGTCATCTGGCACGTGAAGGCTATG
GTGCACAAATGGCGCTGGCGATGGTCTCTTTAATTAACACGATTAACAATATCGCCGAACGTGACCAGGGAACAGCCCGG
GATATTGTGGCCGTATTTGATGAAGCCCATATTTCCACGACGAATCCTTTGTTGTCGCCCTATATGACCAAGGTTGTGAA
AATGTGGCGAAAACTGGGGGCATGGCTGTGGCTGGCGACACAGAACCTCGAGGATTTTCCTGATATTGCGCAGAAAATGC
TGAACATGGCTGAATGGTGGTTGTGCCTGGTTATGCCTCCCGATGAGGTGGAGCAGATTGCCCGTTTCAAAACCCTCAGC
GAGGAGCAAAAAGTTATTTTGCGATCAGCCAGTAAGCTCAAAAACTGTTATACCGAGGGCGTCGTTTTATCAAAGCAGGT
TGAGGCACTGTTCCGGGTTGTGCCTCCCAGTCTGTATCTCGCCCTGGGGATGACTGAAAAAGAGGAAAAAGCGGAACGTC
AGCGGCTGATGCGAGAGTATCAGTGCAGTGAGCTTGAGGCAGCGATCCGGGTGGCCCGCAGGCTGGATGAGGCACGGGGT
TTTTGTCCACAAAAAGCGGCCTGA
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| Protein sequence : | |
MNRLASYIKPHAQRTAFTKAWLAETEQHLRNITRPEGLFTDSLVTGVPWRGQNRSVRMVVYRYLPANYKDDSPVAALNQV
CERLTSALSAAGVLSVRQNGEQIHRWLLRHFNPEPDWIDKDTLYREARYYDDAPDSLPLGNDFTETLWFNPPRSDTRNGV
WWFDNVAHRAVPVETLRRPPGPGHLTGEVKRGDNINTLMDLLPEGTMVSLTIVAQAQDTLEAGFDTLGKNAIGQNTESRR
TRSDVEQVKSLLGMRHKLYRASITFLMRAPDVSELNKKIQQLTATLLTAGLQPTKPEYEVAPLNDYLRALPMCFNPQLDK
KNWYTRLTWVQHLAGLLPVTGRSQGTGHPGFSFFNRGGELLSFDPLNSLDRTQNAHLLLFGPTGAGKSATLCSALSQLMA
VHRPRLFIAEAGNSFGLLAEYFRGLGLSVNVLSIKPGCGISLPMFADAHSLMRVDPKKNVVSEEALPELEPANTDSAEDE
SEERDILGEMEIAARMMITGGEKREEERLTRADRGLIREAIMMAAEKTYQDGHQMLAEDLQAALWNISRDNSIGANGEPM
RNQSRRDRAAEMAEAMAMFTQGFEGELFNRPGTPWPEADVTLIDLGHLAREGYGAQMALAMVSLINTINNIAERDQGTAR
DIVAVFDEAHISTTNPLLSPYMTKVVKMWRKLGAWLWLATQNLEDFPDIAQKMLNMAEWWLCLVMPPDEVEQIARFKTLS
EEQKVILRSASKLKNCYTEGVVLSKQVEALFRVVPPSLYLALGMTEKEEKAERQRLMREYQCSELEAAIRVARRLDEARG
FCPQKAA
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