PAI Gene Information


Name : rmbA
Accession : NP_458174.1
PAI name : SPI-3
PAI accession : NC_003198_P7
Strain : Salmonella enterica RSK2980
Virulence or Resistance: Not determined
Product : conserved hypothetical protein
Function : -
Note : Similar to several including: Salmonella typhimurium hypothetical protein RmbA TR:Q9Z626 (EMBL:AF106566) (205 aa) fasta scores: E(): 0, 99.0% id in 205 aa, Escherichia coli hypothetical protein YqeH SW:YQEH_ECOLI (Q46941) (210 aa) fasta scores: E(): 1.3e-
Homologs in the searched genomes :   45 hits    ( 45 protein-level )  
Publication :
    -Parkhill,J., "Direct Submission", Submitted (25-OCT-2001) Submitted on behalf of the Salmonalla sequencing team, Sanger Centre, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, UK.

    -Parkhill,J., Dougan,G., James,K.D., Thomson,N.R., Pickard,D., Wain,J., Churcher,C., Mungall,K.L., Bentley,S.D., Holden,M.T., Sebaihia,M., Baker,S., Basham,D., Brooks,K., Chillingworth,T., Connerton,P., Cronin,A., Davis,P., Davies,R.M., Dowd,L., White,N., , "Complete genome sequence of a multiple drug resistant Salmonella enterica serovar Typhi CT18", Nature 413 (6858), 848-852 (2001) PUBMED 11677608.

    -Parkhill,J., Dougan,G., James,K.D., Thomson,N.R., Pickard,D., Wain,J., Churcher,C., Mungall,K.L., Bentley,S.D., Holden,M.T., Sebaihia,M., Baker,S., Basham,D., Brooks,K., Chillingworth,T., Connerton,P., Cronin,A., Davis,P., Davies,R.M., Dowd,L., White,N., , "Direct Submission", Submitted (10-SEP-2013) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.


DNA sequence : 
ATGATGAGAAAGCCTTCACAAATTGTCCATTGCATTAGTTGCGATTTATCCTGTCAATTATTCCCTGACAGCGCAGTACG
GGTGCAATACTGTCATAATGCGGCATTTTCCATCTGGCCAGATGGTAATGCTTTCCTGAAAAAAGGGTTTATTGAAAAGT
TATTGCTTGATAGACACAACCATTTATCCAGCGGTTTTATCTTTGTTGATTTTTCTTTCCCGAATCTTCGACGATTTACC
GATTTACAATGGGCTGACAGTCTGGCAAACAGTGGTATGCATATTGTCCTGATTTCTGACAGAAGTTTAACTCCGCTGGC
CAATTACTGGATTTTGAAAAGCAATAAAATACAAGGAATTATTTATTCCGATGACGATGATATTGTGCAACAGCAAAAGA
TGCACCGCTTGTTTACCGGTCGGCTTGCCAACAGTAAACGTGGACGAACGCTTAACTATACGGAATTTATATTACTGAAG
CACTTTGTATCAGGAATAAGTATTCAGCAGATTGTAAATATTGACAATATTGATATTAAGAAACTTTATGTGCATAAGCT
GCGGCTTGAAAATAAGCTAGGGCATAGCATTCATAAAATAATATCAAATATTTTATAG

Protein sequence : 
MMRKPSQIVHCISCDLSCQLFPDSAVRVQYCHNAAFSIWPDGNAFLKKGFIEKLLLDRHNHLSSGFIFVDFSFPNLRRFT
DLQWADSLANSGMHIVLISDRSLTPLANYWILKSNKIQGIIYSDDDDIVQQQKMHRLFTGRLANSKRGRTLNYTEFILLK
HFVSGISIQQIVNIDNIDIKKLYVHKLRLENKLGHSIHKIISNIL