Name : STY2878
Accession : NP_457161.1
PAI name : SPI-9
PAI accession : NC_003198_P4
Strain : Salmonella enterica RSK2980
Virulence or Resistance: Not determined
Product : putative type I secretion protein
Function : -
Note : Similar to many including: Vibrio cholerae secretion protein, HlyD family VCA1080 TR:Q9KKM3 (EMBL:AE004433) (481 aa) fasta scores: E(): 2.3e-22, 35.5% id in 437 aa and to Escherichia coli HlyD protein TR:O08269 (EMBL:Y13891) (478 aa) fasta scores: E(): 2.
Homologs in the searched genomes : 221 hits ( 221 protein-level )
Publication :
-Parkhill,J., "Direct Submission", Submitted (25-OCT-2001) Submitted on behalf of the Salmonalla sequencing team, Sanger Centre, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, UK.
-Parkhill,J., Dougan,G., James,K.D., Thomson,N.R., Pickard,D., Wain,J., Churcher,C., Mungall,K.L., Bentley,S.D., Holden,M.T., Sebaihia,M., Baker,S., Basham,D., Brooks,K., Chillingworth,T., Connerton,P., Cronin,A., Davis,P., Davies,R.M., Dowd,L., White,N., , "Complete genome sequence of a multiple drug resistant Salmonella enterica serovar Typhi CT18", Nature 413 (6858), 848-852 (2001) PUBMED 11677608.
-Parkhill,J., Dougan,G., James,K.D., Thomson,N.R., Pickard,D., Wain,J., Churcher,C., Mungall,K.L., Bentley,S.D., Holden,M.T., Sebaihia,M., Baker,S., Basham,D., Brooks,K., Chillingworth,T., Connerton,P., Cronin,A., Davis,P., Davies,R.M., Dowd,L., White,N., , "Direct Submission", Submitted (10-SEP-2013) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
| DNA sequence : | |
ATGGACGATTTCGATATTCAGCGTGAACGGGCGTTTTCCGGCGCGGGTCGTATTGTTCTGATCTGCTCACTGTTATTTCT
CATTCTCGGCATCTGGGCGTGGTTTGGCCGACTGGATGAGGTTTCCACCGGCAACGGGAAAGTAATCCCCAGTTCACGCG
AACAGGTTCTGCAGTCGCTGGATGGCGGCATTCTGGCGCAGTTGACGGTGCGGGAAGGCGACAGAGTTCAGGCTAACCAG
ATTGTCGCCCAGCTTGATCCGACGCGTCTGGCGTCCAATGTTGGTGAAAGTGCGGCAAAATATCGCGCTTCACTCGCCTC
CAGCGCACGGTTAACCGCGGAAGTCAGCGACTTACCTCTCGCCTTCCCCGCTGAGCTGAACGGCTGGCCGGATCTGATTG
CCGCAGAGACGCGTCTCTATAAAAGCCGCCGCGCGCAGCTGGCCGATACCGAAGCCGAGCTACGGGATGCGCTGGCGTCG
GTTAATAAAGAGCTGACCATTACCCAGCGGCTGGAGAAAAGCGGCGCGGCCAGTCATGTTGAAGTGCTACGCCTGCAACG
ACAAAAAAGCGATTTAGGCTTAAAAATTACCGATCTGCGCTCACAATATTATGTGCAGGCACGCGAAGCGTTATCAAAAG
CGAACGCTGAGGTCGATATGCTCTCCGCCATTTTAAAAGGACGCGAGGATTCCGTCACCCGCCTTACCATACGTTCGCCG
GTACGCGGCATTGTTAAAAATATCCAGGTCACGACGATTGGCGGCGTGATCCCGCCTAACGGTGAGATGATGGAGATAGT
GCCGGTAGACGATCGTCTGTTGATTGAAACCCGCCTTTCGCCGCGTGATATCGCCTTTATTCATCCCGGCCAACGCGCAT
TGGTTAAAATTACTGCTTACGATTACGCCATTTACGGCGGGCTTGACGGCGTGGTGGAGACCATTTCACCGGATACCATT
CAGGATAAAGTGAAACCGGAAATTTTCTACTATCGCGTGTTTATCCGCACCCACCAGGACTATCTACAAAATAAATCAGG
ACGCCGTTTTTCGATTGTTCCAGGCATGATCGCCACGGTGGATATCAAAACCGGTGAAAAAACCATTGTCGACTATTTAA
TCAAACCGTTTAATCGCGCGAAAGAAGCGCTGCGCGAGCGGTAA
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| Protein sequence : | |
MDDFDIQRERAFSGAGRIVLICSLLFLILGIWAWFGRLDEVSTGNGKVIPSSREQVLQSLDGGILAQLTVREGDRVQANQ
IVAQLDPTRLASNVGESAAKYRASLASSARLTAEVSDLPLAFPAELNGWPDLIAAETRLYKSRRAQLADTEAELRDALAS
VNKELTITQRLEKSGAASHVEVLRLQRQKSDLGLKITDLRSQYYVQAREALSKANAEVDMLSAILKGREDSVTRLTIRSP
VRGIVKNIQVTTIGGVIPPNGEMMEIVPVDDRLLIETRLSPRDIAFIHPGQRALVKITAYDYAIYGGLDGVVETISPDTI
QDKVKPEIFYYRVFIRTHQDYLQNKSGRRFSIVPGMIATVDIKTGEKTIVDYLIKPFNRAKEALRER
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