Name : spiA
Accession : NP_456134.1
PAI name : SPI-2
PAI accession : NC_003198_P3
Strain : Salmonella enterica RSK2980
Virulence or Resistance: Virulence
Product : putative outer membrane secretory protein
Function : -
Note : Similar to Salmonella typhimurium outer membrane secretory protein SpiA TR:P74864 (EMBL:U51927) (497 aa) fasta scores: E(): 0, 99.4% id in 497 aa, and to Yersinia pestis kim5 or yscc or ypcd1.52 TR:Q56974 (EMBL:M83225) (607 aa) fasta scores: E(): 7.8e-32,
Homologs in the searched genomes : 82 hits ( 82 protein-level )
Publication :
-Parkhill,J., "Direct Submission", Submitted (25-OCT-2001) Submitted on behalf of the Salmonalla sequencing team, Sanger Centre, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, UK.
-Parkhill,J., Dougan,G., James,K.D., Thomson,N.R., Pickard,D., Wain,J., Churcher,C., Mungall,K.L., Bentley,S.D., Holden,M.T., Sebaihia,M., Baker,S., Basham,D., Brooks,K., Chillingworth,T., Connerton,P., Cronin,A., Davis,P., Davies,R.M., Dowd,L., White,N., , "Complete genome sequence of a multiple drug resistant Salmonella enterica serovar Typhi CT18", Nature 413 (6858), 848-852 (2001) PUBMED 11677608.
-Parkhill,J., Dougan,G., James,K.D., Thomson,N.R., Pickard,D., Wain,J., Churcher,C., Mungall,K.L., Bentley,S.D., Holden,M.T., Sebaihia,M., Baker,S., Basham,D., Brooks,K., Chillingworth,T., Connerton,P., Cronin,A., Davis,P., Davies,R.M., Dowd,L., White,N., , "Direct Submission", Submitted (10-SEP-2013) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
| DNA sequence : | |
ATGGTAGTAAATAAACGTTTAATCTTAATTTTACTATTTATACTCAATACAGCAAAGAGTGATGAGTTATCATGGAAAGG
TAATGACTTCACCCTTTATGCCAGACAAATGCCATTAGCAGAGGTTTTACATCTGCTCTCAGAGAACTATGATACGGCTA
TTACTATTAGCCCATTGATAACAGCTACATTTAGTGGAAAAATTCCGCCTGGACCACCGGTCGATATTTTGAATAACCTG
GCAGCACAATATGATTTGCTAACCTGGTTTGATGGCAGCATGTTATATGTATATCCTGCATCGTTATTAAAACATCAGGT
TATCACTTTCAATATTTTATCTACTGGACGGTTCATTCATTACTTACGCAGCCAGAATATCCTTTCATCACCGGGATGCG
AGGTTAAAGAAATTACCGGTACCAGAGCTGTGGAGGTGAGTGGTGTTCCCAGCTGTCTGACTCGTATTAGTCAATTAGCT
TCAGTGCTGGATAATGCGTTAATCAAACGAAAAGACAGTGCGGTGAGTGTAAGTATATACACGCTTAAGTATGCCACTGC
GATGGATACCCAATACCAATATCGCGATCAGTCCGTCGTGGTTCCAGGGGTCGTGAGTGTATTGCGTGAGATGAGTAAAA
CCAGCGTACCGGCGTCATCGACGACCAATGGTTCACCCGCTACACAGGCATTGCCCATGTTTGCTGCCGACCCACGCCAG
AATGCAGTGATCGTTCGTGATTATGCGGCCAATATGGCCGGGTATCGGAAACTCATCACAGAATTAGATCAACGCCAGCA
GATGATAGAGATTTCGGTGAAAATTATCGATGTTAATGCTGGAGATATTAACCAGTTAGGCATCGACTGGGGAACGGCAG
TGTCGCTGGGTGGCAAGAAAATTGCGTTCAATACAGGTTTGAATGACGGTGGTGCTAGCGGTTTTTCAACGGTAATCAGC
GATACCTCAAACTTTATGGTGCGTTTGAATGCCCTGGAAAAAAGCTCTCAGGCTTATGTACTTTCCCAGCCATCTGTGGT
GACTTTAAATAATATCCAGGCTGTGCTGGATAAAAATATTACTTTCTATACCAAACTGCAGGGAGAAAAAGTGGCTAAAC
TTGAATCCATCACTACGGGTTCTTTGTTGCGCGTTACACCTCGCTTGTTAAATGACAATGGCACGCAAAAAATAATGCTT
AATCTTAATATTCAGGATGGACAACAAAGTGATACGCAAAGCGAAACAGATCCGCTACCCGAAGTGCAAAATTCTGAAAT
TGCTTCGCAAGCCACATTATTGGCCGGACAAAGTCTATTGCTGGGAGGGTTTAAACAAGGTAAACAAATCCACTCGCAAA
ACAAAATCCCTTTATTGGGCGATATCCCTGTCGTAGGTCATTTGTTTCGCAATGATACGACTCAAGTACATAGTGTAATC
AGGCTTTTTTTGATTAAAGCCTCAGTAGTAAATAATGGCATATCTCATGGTTAA
|
| Protein sequence : | |
MVVNKRLILILLFILNTAKSDELSWKGNDFTLYARQMPLAEVLHLLSENYDTAITISPLITATFSGKIPPGPPVDILNNL
AAQYDLLTWFDGSMLYVYPASLLKHQVITFNILSTGRFIHYLRSQNILSSPGCEVKEITGTRAVEVSGVPSCLTRISQLA
SVLDNALIKRKDSAVSVSIYTLKYATAMDTQYQYRDQSVVVPGVVSVLREMSKTSVPASSTTNGSPATQALPMFAADPRQ
NAVIVRDYAANMAGYRKLITELDQRQQMIEISVKIIDVNAGDINQLGIDWGTAVSLGGKKIAFNTGLNDGGASGFSTVIS
DTSNFMVRLNALEKSSQAYVLSQPSVVTLNNIQAVLDKNITFYTKLQGEKVAKLESITTGSLLRVTPRLLNDNGTQKIML
NLNIQDGQQSDTQSETDPLPEVQNSEIASQATLLAGQSLLLGGFKQGKQIHSQNKIPLLGDIPVVGHLFRNDTTQVHSVI
RLFLIKASVVNNGISHG
|
|
