PAI Gene Information


Name : sscA
Accession : NP_456129.1
PAI name : SPI-2
PAI accession : NC_003198_P3
Strain : Salmonella enterica RSK2980
Virulence or Resistance: Virulence
Product : putative Type III secretion system chaperone protein
Function : -
Note : Similar to Salmonella typhimurium putative secretion chaperone SscA TR:O84946 (EMBL:AF020808) (157 aa) fasta scores: E(): 0, 98.1% id in 157 aa, and to Escherichia coli CesD TR:O52134 (EMBL:AF022236) (151 aa) fasta scores: E(): 5.6e-09, 29.5% id in 139 aa
Homologs in the searched genomes :   49 hits    ( 49 protein-level )  
Publication :
    -Parkhill,J., "Direct Submission", Submitted (25-OCT-2001) Submitted on behalf of the Salmonalla sequencing team, Sanger Centre, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, UK.

    -Parkhill,J., Dougan,G., James,K.D., Thomson,N.R., Pickard,D., Wain,J., Churcher,C., Mungall,K.L., Bentley,S.D., Holden,M.T., Sebaihia,M., Baker,S., Basham,D., Brooks,K., Chillingworth,T., Connerton,P., Cronin,A., Davis,P., Davies,R.M., Dowd,L., White,N., , "Complete genome sequence of a multiple drug resistant Salmonella enterica serovar Typhi CT18", Nature 413 (6858), 848-852 (2001) PUBMED 11677608.

    -Parkhill,J., Dougan,G., James,K.D., Thomson,N.R., Pickard,D., Wain,J., Churcher,C., Mungall,K.L., Bentley,S.D., Holden,M.T., Sebaihia,M., Baker,S., Basham,D., Brooks,K., Chillingworth,T., Connerton,P., Cronin,A., Davis,P., Davies,R.M., Dowd,L., White,N., , "Direct Submission", Submitted (10-SEP-2013) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.


DNA sequence :
ATGAAAAAAGACCCGACCCTACAACAGGCACATGACACGATGCGATTTTTCCGGCGTGGCGGCTCGCTGCGTATGTTGTT
GGATGACGATGTTACACAGCCGCTTAATACTGTGTATCGCTATGCCATGCAGCTTATGGAGGTAAAAGAATTCGCCGGCG
CAGCGCGACTTTTTCAATTGCTGACGATATATGATGCCTGGTCATTTGACTACTGGTTTCGGTTAGGGGAATGCTGCCAG
GCTCAAAAACATTGGGGGGAAGCGATATACGCTTATGGACGCGCGGCACAAATTAAGATTGATGCGCCGCAGGCGCCATG
GGCCGCAGCGGAATGCTATCTCGCGTGTGATAACGTCTGTTATGCAATAAAAGCGTTAAAAGCCGTGGTGCGTATTTGCG
GCGAGGTCAGTGAACATCAAATCCTCCGACTACGTGCAGAAAAGATGTTACAGCAGCTTTCTGACAGGAGCTAA

Protein sequence :
MKKDPTLQQAHDTMRFFRRGGSLRMLLDDDVTQPLNTVYRYAMQLMEVKEFAGAARLFQLLTIYDAWSFDYWFRLGECCQ
AQKHWGEAIYAYGRAAQIKIDAPQAPWAAAECYLACDNVCYAIKALKAVVRICGEVSEHQILRLRAEKMLQQLSDRS