Name : sseC
Accession : NP_456128.1
PAI name : SPI-2
PAI accession : NC_003198_P3
Strain : Salmonella enterica RSK2980
Virulence or Resistance: Virulence
Product : putative pathogenicity island effector protein
Function : -
Note : Similar to Salmonella typhimurium SseC TR:O84947 (EMBL:AF020808) (484 aa) fasta scores: E(): 0, 95.2% id in 484 aa
Homologs in the searched genomes : 41 hits ( 41 protein-level )
Publication :
-Parkhill,J., "Direct Submission", Submitted (25-OCT-2001) Submitted on behalf of the Salmonalla sequencing team, Sanger Centre, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, UK.
-Parkhill,J., Dougan,G., James,K.D., Thomson,N.R., Pickard,D., Wain,J., Churcher,C., Mungall,K.L., Bentley,S.D., Holden,M.T., Sebaihia,M., Baker,S., Basham,D., Brooks,K., Chillingworth,T., Connerton,P., Cronin,A., Davis,P., Davies,R.M., Dowd,L., White,N., , "Complete genome sequence of a multiple drug resistant Salmonella enterica serovar Typhi CT18", Nature 413 (6858), 848-852 (2001) PUBMED 11677608.
-Parkhill,J., Dougan,G., James,K.D., Thomson,N.R., Pickard,D., Wain,J., Churcher,C., Mungall,K.L., Bentley,S.D., Holden,M.T., Sebaihia,M., Baker,S., Basham,D., Brooks,K., Chillingworth,T., Connerton,P., Cronin,A., Davis,P., Davies,R.M., Dowd,L., White,N., , "Direct Submission", Submitted (10-SEP-2013) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
| DNA sequence : | |
ATGAATCGAATTCACAGTAATAGCGATAGCGCCGCAGGAGTAACCGCCTTAACACATCATCACTTAAGCAATGTCAGTTG
CGTTTCCTCGGGTTCGCTGGGAAAGCGCCAGCATCGTGTGAATTCTACTTTTGGCGATGGCAACGCCGCGTGTCTGCTAT
CCGGGAAAATTAGTCTTCAGGAGGCAAGCAATGCGTTGAAGCAACTGCTTGATGCCGTACCCGGAAATCATAAGCGTCCA
TCATTGCCTGACTTTTTGCAGACCAATCCCGCGGTTTTATCAATGATGATGACGTCATTAATACTCAACGTCTTTGGTAA
TAACGCTCAATCGTTATGCCAACAGCTTGAGCGGGCAACTGAGGTGCAAAATGCATTACGTAATAAGCAGGTAAAGGAGT
ATCAGGAGCAGATCCAGAAAGCGATAGAGCAGGAGGATAAAGCGCGTAAAGCGGGTATTTTTGGCGCTATTTTTGACTGG
ATTACCGGCATATTTGAAACCGTGATTGGCGCCTTAAAAGTTGTGGAAGGTTTTCTGTCCGGTAATCCCGCAGAAATGGC
TAGCGGCGTAGCTTATATGGCCGCAGGTTGTGCAGGAATGGTTAAAGCCGGAGCCGAAACGGCAATGATGTGCGGTGCTG
ACCACGATACCTGTCAGGCGATTATTGACGTGACAAGTAAGATTCAATTTGGTTGTGAAGCCGTCGCGCTGGCACTGGAT
GTTTTCCAGATTGGCCGTGCTTTTATGGCGACGAGAGGTTTATCTGGCGCAGCTGCAAAAGTGCTTGACTCCGGTTTTGG
CGAGGAAATGGTTGAGCGTATGGTTGGTGCAGGGGAAGCAGAAATAGAGGCGTTGGCTGAAAAGTTTGGCGAAGAAGTGA
GCGAAAGTTTTTCCAAACAATTTGAGCCGCTTGAACGTGAAATGGTTTCGCCGGGCGAGATGGAAGAGGAGTCTGCCGAA
TTTTCTCGTAACGTAGAAAAAAATATGACAAAAAATGCGGGAAAAAGTTTTACGAAAGAGGGGGTGAAAGCCATGGCAAA
AGAAGCGGTAAAAGAAGCCCTGGAAAAATATGCGCAAGAAGGGGAAAAGTTTCTGTTAAAAAATTTTCGTAATAAAGTTC
TCTTCAATATGTTCAAAAAAATCCTGTATGCCTTACTGAGGGATTGTTCATTTAAAGGCTTACAGGCTATCAGATGTGCA
ACCGAGGGTGCCAATCAGATGAATACTGGCATGGTTAACACAGAAAAAGCGAAGCTTGAAAAGAAAATAGAGCAATTAAT
AACTCAGCAACGGTTTCTGGATTTCATAATGCAACAAACGGATGACCAAAAAAAGATAGAACAAAAACGCTTAGAGGGGC
TTTATAAAGGTAGCGGTGCCGCGCTTAGAGGTGTATTAGATACCATTGATCACTATAGTAGCGTTCAGGCGAGAATAGCT
GGCTGGCGCGCTTAA
|
| Protein sequence : | |
MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQEASNALKQLLDAVPGNHKRP
SLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERATEVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDW
ITGIFETVIGALKVVEGFLSGNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD
VFQIGRAFMATRGLSGAAAKVLDSGFGEEMVERMVGAGEAEIEALAEKFGEEVSESFSKQFEPLEREMVSPGEMEEESAE
FSRNVEKNMTKNAGKSFTKEGVKAMAKEAVKEALEKYAQEGEKFLLKNFRNKVLFNMFKKILYALLRDCSFKGLQAIRCA
TEGANQMNTGMVNTEKAKLEKKIEQLITQQRFLDFIMQQTDDQKKIEQKRLEGLYKGSGAALRGVLDTIDHYSSVQARIA
GWRA
|
|
