PAI Gene Information


Name : STY1709
Accession : NP_456117.1
PAI name : SPI-2
PAI accession : NC_003198_P3
Strain : Salmonella enterica RSK2980
Virulence or Resistance: Virulence
Product : putative pathogenicity island protein
Function : -
Note : Similar to Salmonella typhimurium secretion system apparatus protein SsaK SW:SSAK_SALTY () (314 aa) fasta scores: E(): 0, 98.7% id in 224 aa. Note discrepency in predicted translational start site.
Homologs in the searched genomes :   39 hits    ( 38 protein-level,   1 DNA-level )  
Publication :
    -Parkhill,J., "Direct Submission", Submitted (25-OCT-2001) Submitted on behalf of the Salmonalla sequencing team, Sanger Centre, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, UK.

    -Parkhill,J., Dougan,G., James,K.D., Thomson,N.R., Pickard,D., Wain,J., Churcher,C., Mungall,K.L., Bentley,S.D., Holden,M.T., Sebaihia,M., Baker,S., Basham,D., Brooks,K., Chillingworth,T., Connerton,P., Cronin,A., Davis,P., Davies,R.M., Dowd,L., White,N., , "Complete genome sequence of a multiple drug resistant Salmonella enterica serovar Typhi CT18", Nature 413 (6858), 848-852 (2001) PUBMED 11677608.

    -Parkhill,J., Dougan,G., James,K.D., Thomson,N.R., Pickard,D., Wain,J., Churcher,C., Mungall,K.L., Bentley,S.D., Holden,M.T., Sebaihia,M., Baker,S., Basham,D., Brooks,K., Chillingworth,T., Connerton,P., Cronin,A., Davis,P., Davies,R.M., Dowd,L., White,N., , "Direct Submission", Submitted (10-SEP-2013) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.


DNA sequence : 
ATGAGTTTTACTTCACTTCCTCTGACGGAAATTAACCATAAGCTACCCGCTCGAAATATTATTGAGTCACAGTGGATAAC
ATTACAATTAACTTTATTTGCACAAGAGCAACAAGCTAAGAGAGTTTCACATGCTATTGTGAGCTCCGCTTACCGTAAGG
CTGAAAAAATCATCCGAGACGCCTATCGTTATCAGCGTGAACAGAAAGTTGAGCAGCAACAAGAAATAGCGTGGTTGCGT
AAAAATACGCTGGAAAAAATGGAAGTAGAATGGCTGGAACAACATGTAAAACATTTACAAGAAGATGAAAATCAATTTCG
TTCATTGGTCGATCACGCCGCGCATCATATTAAAAATAGTATAGAACAGGTTCTGTTGGCCTGGTTCGACCAACAGTCGG
TAGACAGTGTTATGTGCCATCGTCTGGCACGCCAGGCCACGGCTATGGCGGAAGAGGGAGCGCTTTATTTGCGTATTCAT
CCTGAAAAAGAGGCATTGATGCGTGAAACTTTTGGCAAGCGGTTTACGCTGATTATCGAGCCTGGTTTCTCTCCCGATCA
GGCTGAACTTTCCTCAACACGATATGCCGTTGAGTTTTCACTTTCTCGTCATTTCAACGCGTTACTGAAATGGTTACGTA
ATGGTGAAGATAAAAGAGGTAGCGATGAATATTAA

Protein sequence : 
MSFTSLPLTEINHKLPARNIIESQWITLQLTLFAQEQQAKRVSHAIVSSAYRKAEKIIRDAYRYQREQKVEQQQEIAWLR
KNTLEKMEVEWLEQHVKHLQEDENQFRSLVDHAAHHIKNSIEQVLLAWFDQQSVDSVMCHRLARQATAMAEEGALYLRIH
PEKEALMRETFGKRFTLIIEPGFSPDQAELSSTRYAVEFSLSRHFNALLKWLRNGEDKRGSDEY