PAI Gene Information


Name : ssaT
Accession : NP_456107.1
PAI name : SPI-2
PAI accession : NC_003198_P3
Strain : Salmonella enterica RSK2980
Virulence or Resistance: Virulence
Product : putative type III secretion protein
Function : -
Note : Similar to Salmonella typhimurium secretion system apparatus protein SsaT SW:SSAT_SALTY (P96068) (259 aa) fasta scores: E(): 0, 98.5% id in 259 aa, and to Yersinia pestis type III secretion protein YscT TR:AAC69785 (EMBL:AF074612) (261 aa) fasta scores: E
Homologs in the searched genomes :   63 hits    ( 63 protein-level )  
Publication :
    -Parkhill,J., "Direct Submission", Submitted (25-OCT-2001) Submitted on behalf of the Salmonalla sequencing team, Sanger Centre, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, UK.

    -Parkhill,J., Dougan,G., James,K.D., Thomson,N.R., Pickard,D., Wain,J., Churcher,C., Mungall,K.L., Bentley,S.D., Holden,M.T., Sebaihia,M., Baker,S., Basham,D., Brooks,K., Chillingworth,T., Connerton,P., Cronin,A., Davis,P., Davies,R.M., Dowd,L., White,N., , "Complete genome sequence of a multiple drug resistant Salmonella enterica serovar Typhi CT18", Nature 413 (6858), 848-852 (2001) PUBMED 11677608.

    -Parkhill,J., Dougan,G., James,K.D., Thomson,N.R., Pickard,D., Wain,J., Churcher,C., Mungall,K.L., Bentley,S.D., Holden,M.T., Sebaihia,M., Baker,S., Basham,D., Brooks,K., Chillingworth,T., Connerton,P., Cronin,A., Davis,P., Davies,R.M., Dowd,L., White,N., , "Direct Submission", Submitted (10-SEP-2013) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.


DNA sequence : 
ATGACACAACAGGTAAATGAGTGGCTTATTGCATTGGCTGTGGCTTTTATTCGACCATTGAGCCTTTCTTTATTACTTCC
TCTATTAAAAAGTGGCAGTTTAGGGGCCGCGCTTTTACGTAATGGCGTGCTTATGTCACTTACCTTTCCCATATTACCAA
TCATTTACCAGCAGAAGATTATGATGCATATTGGTAAAGATTACAGCTGGTTAGGGTTAGTCACCGGAGAGGTGATTATT
GGTTTTTTAATTGGGTTTTGTGCGGCGGTTCCCTTTTGGGCCGTTGATATGGCGGGGTTTCTGCTTGATACTTTACGTGG
CGCGACAATGGGTACGATATTCAATTCTACAATGGAAGCTGAAACCTCACTTTTTGGCTTGCTTTTCAGCCAGTTTTTGT
GTGTTATTTTCTTTATAAGCGGCGGCATGGAGTTTATATTAAACATTCTGTATGAGTCATACCAATATTTACCGCCAGGG
CGTACTTTATTATTTGATCGGCAATTTTTAAAATATATCCAGGCAGAGTGGAGAACGCTTTATCAATTATGCATCAGCTT
CTCTCTTCCTGCCATAATATGTATGGTATTAGCCGATCTGGCTTTAGGTCTTTTAAATCGGTCGGCACAACAATTGAATG
TGTTTTTCTTCTCAATGCCGCTCAAAAGTATATTAGTTCTACTAACGCTCCTGATCTCATTCCCTTATGCTCTTCATCAC
TATTTGGTTGAAAGCGATAAGTTTTATATTTATCTAAAAGACTGGTTTCCATCTGTATGA

Protein sequence : 
MTQQVNEWLIALAVAFIRPLSLSLLLPLLKSGSLGAALLRNGVLMSLTFPILPIIYQQKIMMHIGKDYSWLGLVTGEVII
GFLIGFCAAVPFWAVDMAGFLLDTLRGATMGTIFNSTMEAETSLFGLLFSQFLCVIFFISGGMEFILNILYESYQYLPPG
RTLLFDRQFLKYIQAEWRTLYQLCISFSLPAIICMVLADLALGLLNRSAQQLNVFFFSMPLKSILVLLTLLISFPYALHH
YLVESDKFYIYLKDWFPSV