Name : hsdM (SAV0431)
Accession : NP_370955.1
PAI name : vSa_alpha
PAI accession : NC_002758_P1
Strain : Staphylococcus aureus 04-02981
Virulence or Resistance: Not determined
Product : type I site-specific deoxyribonuclease LldI chain
Function : -
Note : Pathogenicity island SaPIn2
Homologs in the searched genomes : 428 hits ( 428 protein-level )
Publication :
-Hattori,M., Yamashita,A., Oshima,K. and Shiba,T., "Direct Submission", Submitted (28-FEB-2001) Kitasato Institute for Life Science, Kitasato University, Kitasato 1-15-1, Sagamihara, Kanagawa 228-8555, Japan.
-Kuroda,M., Ohta,T., Uchiyama,I., Baba,T., Yuzawa,H., Kobayashi,I., Cui,L., Oguchi,A., Aoki,K., Nagai,Y., Lian,J., Ito,T., Kanamori,M., Matsumaru,H., Maruyama,A., Murakami,H., Hosoyama,A., Mizutani-Ui,Y., Kobayashi,N., Tanaka,T., Sawano,T., Inoue,R., Kaito, "Whole genome sequencing of meticillin-resistant Staphylococcus aureus", Lancet 357 (9264), 1225-1240 (2001) PUBMED 11418146.
-Kuroda,M., Ohta,T., Uchiyama,I., Baba,T., Yuzawa,H., Kobayashi,I., Cui,L., Oguchi,A., Aoki,K., Nagai,Y., Lian,J., Ito,T., Kanamori,M., Matsumaru,H., Maruyama,A., Murakami,H., Hosoyama,A., Mizutani-Ui,Y., Kobayashi,N., Tanaka,T., Sawano,T., Inoue,R., Kaito, "Direct Submission", Submitted (04-OCT-2001) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
-Ohta,T., Hirakawa,H., Morikawa,K., Maruyama,A., Inose,Y., Yamashita,A., Oshima,K., Kuroda,M., Hattori,M., Hiramatsu,K., Kuhara,S. and Hayashi,H., "Nucleotide substitutions in Staphylococcus aureus strains, Mu50, Mu3, and N315", DNA Res. 11 (1), 51-56 (2004) PUBMED 15141945.
| DNA sequence : | |
ATGTCTATTACTGAAAAACAACGTCAGCAACAAGCTGAATTACATAAAAAATTATGGTCGATTGCGAATGATTTAAGAGG
GAATATGGATGCGAGTGAATTCCGTAATTACATTTTAGGCTTGATTTTCTATCGCTTCTTATCTGAAAAAGCGGAACAAG
AATATGCAGATGCCTTGTCAGGTGAAGATATTACGTATCAAGAAGCATGGGCAGATGAAGAATATCGTGAAGACTTAAAA
GCTGAATTAATTGATCAAGTCGGTTACTTCATTGAACCACAAGATTTATTCAGTGCGATGATTCGTGAAATTGAAACGCA
AGATTTCGATATCGAACATCTCGCAACGGCGATTCGTAAAGTTGAAACATCAACACTAGGTGAAGAAAGTGAAAATGACT
TTATCGGACTGTTCAGCGATATGGACTTAAGTTCAACGCGACTAGGTAACAATGTCAAAGAACGTACTGCACTAATTTCC
AAAGTTATGGTTAACCTTGACGACTTACCATTCGTTCACAGTGATATGGAAATTGATATGTTAGGTGATGCATACGAATT
TCTTATCGGGCGCTTTGCGGCGACAGCAGGTAAAAAAGCAGGCGAGTTCTATACACCACAACAAGTATCTAAGATACTGG
CGAAGATTGTCACAGACGGTAAAGATAAATTACGTCACGTGTATGACCCAACATGTGGTTCAGGTTCATTATTGTTACGT
GTTGGTAAAGAAACGCAAGTGTATCGTTATTTCGGTCAAGAACGTAACAATACCACTTACAACTTAGCGCGCATGAACAT
GTTATTACATGATGTGCGCTATGAAAACTTTGATATCCGTAATGATGATACGTTGGAAAATCCAGCTTTCTTAGGCAATA
CATTTGATGCGGTTATAGCGAACCCACCATACAGTGCGAAATGGACTGCAGATTCAAAATTTGAAAATGATGAACGCTTC
AGTGGTTACGGCAAGCTTGCGCCAAAATCCAAAGCAGACTTTGCCTTTATTCAACATATGGTACATTACCTAGACGATGA
AGGTACCATGGCAGTTGTACTCCCACATGGTGTCTTATTCCGTGGTGCCGCAGAAGGCGTCATTCGTCGTTATTTAATTG
AAGAAAAGAACTACTTAGAAGCCGTGATTGGCTTACCAGTGAATATTTTCTATGGGACAAGTATTCCAACATGTATCTTA
GTATTTAAAAAATGTTGCCAACAAGACGACAACGTATTATTTATCGATGCATCCAATGATTTTGAAAAAGGAAAAAATCA
AAACCATTTAAGCGATGCCCAAGTCGAACGTATTATTGACACATACAAGCGTAAAGAAACAATTGATAAATACAGTTACA
GTGCGACATTACAAGAGATTGCCGATAACGATTACAACCTAAACATACCGAGGTATGTCGATACATTCGAAGAAGAAGCG
CCAATTGATTTAGATCAAGTCCAACAAGATTTGAAAAATATCGACAAAGAAATCGCAGAAATTGAACAAGAAATCAATGC
ATACCTGAAAGAACTTGGGGTGTTGAAAGATGAGTAA
|
| Protein sequence : | |
MSITEKQRQQQAELHKKLWSIANDLRGNMDASEFRNYILGLIFYRFLSEKAEQEYADALSGEDITYQEAWADEEYREDLK
AELIDQVGYFIEPQDLFSAMIREIETQDFDIEHLATAIRKVETSTLGEESENDFIGLFSDMDLSSTRLGNNVKERTALIS
KVMVNLDDLPFVHSDMEIDMLGDAYEFLIGRFAATAGKKAGEFYTPQQVSKILAKIVTDGKDKLRHVYDPTCGSGSLLLR
VGKETQVYRYFGQERNNTTYNLARMNMLLHDVRYENFDIRNDDTLENPAFLGNTFDAVIANPPYSAKWTADSKFENDERF
SGYGKLAPKSKADFAFIQHMVHYLDDEGTMAVVLPHGVLFRGAAEGVIRRYLIEEKNYLEAVIGLPVNIFYGTSIPTCIL
VFKKCCQQDDNVLFIDASNDFEKGKNQNHLSDAQVERIIDTYKRKETIDKYSYSATLQEIADNDYNLNIPRYVDTFEEEA
PIDLDQVQQDLKNIDKEIAEIEQEINAYLKELGVLKDE
|
|
