Name : lipA (NMB0082)
Accession : NP_273145.1
PAI name : IHT-A
PAI accession : NC_003112_P1
Strain : Neisseria meningitidis 053442
Virulence or Resistance: Not determined
Product : capsule polysaccharide modification protein
Function : -
Note : identified by similarity to EGAD:15481; match to protein family HMM PF05159
Homologs in the searched genomes : 94 hits ( 94 protein-level )
Publication :
-Tettelin,H., Saunders,N.J., Heidelberg,J., Jeffries,A.C., Nelson,K.E., Eisen,J.A., Ketchum,K.A., Hood,D.W., Ciecko,A., Peden,J.F., Dodson,R.J., Nelson,W.C., Gwinn,M.L., Peterson,J.D., Hickey,E.K., Haft,D.H., Salzberg,S.L., White,O., Fleischmann,R.D., Doug, "Direct Submission", Submitted (18-MAY-2005) The Institute for Genomic Research, 9712 Medical Center Dr, Rockville, MD 20850, USA REMARK Sequence update by submitter.
-Tettelin,H., Saunders,N.J., Heidelberg,J., Jeffries,A.C., Nelson,K.E., Eisen,J.A., Ketchum,K.A., Hood,D.W., Ciecko,A., Peden,J.F., Dodson,R.J., Nelson,W.C., Gwinn,M.L., Peterson,J.D., Hickey,E.K., Haft,D.H., Salzberg,S.L., White,O., Fleischmann,R.D., Doug, "Direct Submission", Submitted (19-SEP-2001) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
-Tettelin,H., Saunders,N.J., Heidelberg,J., Jeffries,A.C., Nelson,K.E., Eisen,J.A., Ketchum,K.A., Hood,D.W., Ciecko,A., Peden,J.F., Dodson,R.J., Nelson,W.C., Gwinn,M.L., Peterson,J.D., Hickey,E.K., Haft,D.H., Salzberg,S.L., White,O., Fleischmann,R.D., Doug, "Direct Submission", Submitted (17-MAR-2000) The Institute for Genomic Research, 9712 Medical Center Dr, Rockville, MD 20850, USA.
-Tettelin,H., Saunders,N.J., Heidelberg,J., Jeffries,A.C., Nelson,K.E., Eisen,J.A., Ketchum,K.A., Hood,D.W., Peden,J.F., Dodson,R.J., Nelson,W.C., Gwinn,M.L., DeBoy,R., Peterson,J.D., Hickey,E.K., Haft,D.H., Salzberg,S.L., White,O., Fleischmann,R.D., Dough, "Complete genome sequence of Neisseria meningitidis serogroup B strain MC58", Science 287 (5459), 1809-1815 (2000) PUBMED 10710307.
| DNA sequence : | |
ATGTTCCTCTTTTCAGACGGCCTACAATCCATTAATAACAATAATCGACGAAAACGCATTGTGAAAAACGCCTACATCCC
CTCTCGCGGCATCCGCAAAATCCCCCATCTCTCCACCCTATTGCCTGAATTTCATATCTGCAAAGACGGGAAAGAAGCAG
AGGCTGTTGTCGGCTGGGGTTTGCGCCCGACGACACACAAAGCGCGTGCTTTTGCCGCTGAACACCAGCTTCCCTTTATT
GCTTTGGAAGACGGCTTTTTACGATCGCTCGGACTGGGTGTCGCCGGTTATCCGCCCTACTCTATCGTCTATGACGACAT
CGGCATCTACTACGACACCACACGTCCTTCGCGTTTGGAACAACTGATTCTTGCCGCCGATACCATGCCGTCTGAAACCT
TGGCTCAGGCGCAGCAGGCGATGGATTTCATCCTGCAACACCACCTGTCCAAATACAACCACGCGCCCGAACTTTCAGAC
GACCATCCTTTACGTTCCCCATCCAAACCCGAAACCGTCCTCATCATCGACCAAACCTTCGGCGATATGGCCATCCAATA
TGGCGGCGCAGACGCCTCTACGTTTGAACTGATGTTTCAGACGGCCTTAAATGAAAACCCGCAAGCCGATATCTGGGTAA
AAACCCATCCCGATGTTTTGTGCGGCAAAAAACAAGGCTATCTGACCCAACTGGCGCAGCAACACCGCGTCCATCTTTTG
GCAGAAGACATCAATCCGATTTCTTTGTTGCAAAACGTTGATAAAGTTTATTGCGTTACCTCGCAAATGGGTTTTGAGGC
GCTTTTGTGCGGCAAACCGCTGACCACTTTCGGCCTGCCGTGGTATGCCGGATGGGGTGTAAGCGACGACCGCCATCCTG
AAATCAACCGCCTTGTTCAAACCCAACGCCGCGCCACCCGCAACTTGCTGCAGCTCTTCGCCGCAGCCTATCTGCAATAC
AGCCGCTACCTCAACCCCAATACCGGCGAAGCAGGCAGCCTCTTTGATGTCATCGACTATCTGGCGACGGTCAAACGTAA
AAACGACAAATTGCGTGGCGAGTTATATTGCGTCGGTATGTCTTTGTGGAAACGCGCGGTTGCCAAACCGTTCTTTAACG
TACCCTCTTGCCGTCTGAAATTTATCTCTTCCACCCAAAAACTGGCAAGGGTCAAACTGTCCGACGATGCACGCATCCTG
GCTTGGGGCAACGGCAAAGAGGCCATCGTCCGCTTTGCCGAACAACACCACATCCCCCTGCTGCGCATGGAAGACGGCTT
TATCCGCTCGGTCGGACTCGGCTCCAACTTAGTGCCGCCGCTGTCGCTCGTTACCGACGATATGAGCATTTATTTCAATG
CCGAAACCCCGTCCCGTCTTGAATACATCCTACAAAACCAAAACTTCGACGATCAAGACTTTCAGACGGCCTTGAAGCTG
CAAAAAATGCTGACCGAAAACCACATCAGTAAATACAACGTCGGCAGCTCAGACTTCACCGCCCCGTCAACCGACAAAAC
CGTGATCCTCGTTCCCGGCCAGGTTGAAGATGATGCGTCTATCCGCTACGGTTCGCCCCAAATCTACCGCAATCTGGATT
TGCTCCGTACCGTACGCGAACGAAACCCCAATGCCTATATCATCTACAAACCGCATCCCGATGTAGTCAGCGGTAACCGC
ATCGGCCATATTTCCCCTGAAGATGCTGCACGATATGCCGACCAAACCGCCGAACAAGCCGACATCCTGACCTGTCTCCA
ATACGCAGACGAAATACATACCATGACTTCGCTGACCGGTTTTGAAGCCTTGTTGCGCGGCAAAAAAGTCAGCTGCTACG
GCCTGCCTTTTTACGCAGGCTGGGGGCTTACCCAAGATCTGCTCCCCATCCCGCGCCGTAGCCGCAGACTTGAGCTTTGG
CAGCTGATTGCCGGCACGCTCATCCACTATCCCGACTACATCCACCCCGAAACCCATCAGGCCATAAATGCAGAAACCGC
AGCCCAAATCCTGATACGACAAAAAAATATGCAAAAAAACAACAACGGATTACATCGCGGGTGCTTTGCCAAAAAATTAG
GTAAAATCAAACAACTATATCGATCTTTCAAATAA
|
| Protein sequence : | |
MFLFSDGLQSINNNNRRKRIVKNAYIPSRGIRKIPHLSTLLPEFHICKDGKEAEAVVGWGLRPTTHKARAFAAEHQLPFI
ALEDGFLRSLGLGVAGYPPYSIVYDDIGIYYDTTRPSRLEQLILAADTMPSETLAQAQQAMDFILQHHLSKYNHAPELSD
DHPLRSPSKPETVLIIDQTFGDMAIQYGGADASTFELMFQTALNENPQADIWVKTHPDVLCGKKQGYLTQLAQQHRVHLL
AEDINPISLLQNVDKVYCVTSQMGFEALLCGKPLTTFGLPWYAGWGVSDDRHPEINRLVQTQRRATRNLLQLFAAAYLQY
SRYLNPNTGEAGSLFDVIDYLATVKRKNDKLRGELYCVGMSLWKRAVAKPFFNVPSCRLKFISSTQKLARVKLSDDARIL
AWGNGKEAIVRFAEQHHIPLLRMEDGFIRSVGLGSNLVPPLSLVTDDMSIYFNAETPSRLEYILQNQNFDDQDFQTALKL
QKMLTENHISKYNVGSSDFTAPSTDKTVILVPGQVEDDASIRYGSPQIYRNLDLLRTVRERNPNAYIIYKPHPDVVSGNR
IGHISPEDAARYADQTAEQADILTCLQYADEIHTMTSLTGFEALLRGKKVSCYGLPFYAGWGLTQDLLPIPRRSRRLELW
QLIAGTLIHYPDYIHPETHQAINAETAAQILIRQKNMQKNNNGLHRGCFAKKLGKIKQLYRSFK
|
|
