Name : VC1769 (VC1769)
Accession : NP_231404.1
PAI name : VPI-2
PAI accession : NC_002505_P5
Strain : Vibrio cholerae IEC224
Virulence or Resistance: Not determined
Product : DNA methylase HsdM
Function : -
Note : similar to GB:AL123456; identified by sequence similarity
Homologs in the searched genomes : 71 hits ( 71 protein-level )
Publication :
-Heidelberg,J.F., Eisen,J.A., Nelson,W.C., Clayton,R.A., Gwinn,M.L., Dodson,R.J., Haft,D.H., Hickey,E.K., Peterson,J.D., Umayam,L.A., Gill,S.R., Nelson,K.E., Read,T.D., Tettelin,H., Richardson,D., Ermolaeva,M.D., Vamathevan,J., Bass,S., Qin,H., Dragoi,I., , "DNA sequence of both chromosomes of the cholera pathogen Vibrio cholerae", Nature 406 (6795), 477-483 (2000) PUBMED 10952301.
-Heidelberg,J.F., Eisen,J.A., Nelson,W.C., Clayton,R.A., Gwinn,M.L., Dodson,R.J., Haft,D.H., Hickey,E.K., Peterson,J.D., Umayam,L.A., Gill,S.R., Nelson,K.E., Read,T.D., Tettelin,H., Richardson,D., Ermolaeva,M.D., Vamathevan,J., Bass,S., Qin,H., Dragoi,I., , "Direct Submission", Submitted (18-SEP-2001) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
-Heidelberg,J.F., Eisen,J.A., Nelson,W.C., Clayton,R.A., Gwinn,M.L., Dodson,R.J., Haft,D.H., Hickey,E.K., Peterson,J.D., Umayam,L.A., Gill,S.R., Nelson,K.E., Read,T.D., Tettelin,H., Richardson,D., Ermolaeva,M.D., Vamathevan,J., Bass,S., Qin,H., Dragoi,I., , "Direct Submission", Submitted (14-JUN-2000) The Institute for Genomic Research, 9712 Medical Center Dr, Rockville, MD 20850, USA.
| DNA sequence : | |
ATGGACCACTCAGTACATAACAAACTCGTTTCATTTATTTGGTCGATTGCCGACGACTGTCTTCGTGATGTCTATGTTCG
TGGTAAATACCGCGACGTTATCTTGCCTATGGTGGTGCTACGCCGTCTGGATACGCTTTTGGAGCCATCAAAAGAAGCAG
TACTGGAAGAAGTCAGATTCCAAAAAGAAGAGATGAATGAAATTGAGCTTGATGACGCACCATTATGCGCTACATCAGGT
TATGTGTTCTACAACACGTCCAAGTGGACTCTGCAAACGCTATTCAGTACAGCGACTAACAACCAACAGATTCTGCTGGC
TAACTTCGAAGATTACCTCAACGGTTTTAGCGAAAACGTAAAAGAGATTGTTGAGTGTTTTAACCTGAAAGCCCAAATCC
GTCACATGGCAGGGAAAGACGTTCTGCTAGATGTGGTTGAGAAATTCGTCTCGCCGTACATCAACTTAACGCCAGCGGTT
AAAGAAGATCCTGAGGGTAACAAACTACCAGCACTCAGCAACCTTGGTATGGGCTATGTATTTGAAGAATTGATTCGTAA
GTTCAACGAAGAGAACAACGAAGAGGCGGGGGAGCACTTTACTCCGCGTGAAGTGATCGAGCTGATGACGCACCTTGTTT
TCGATCCAATCAAAGATAACTTGCCACTTTCTATCACAGTGTATGACCCAGCATGTGGTAGTGGCGGTATGCTGACAGAA
ACGCAAAACTTTGTTGAAGAGAAATACCCAGCATCAAACCGTGATATCTACCTTTACGGTAAAGAGATCAACGATGAGAC
TTACGCTATCTGTAAGTCAGATATGATGATCAAAGGTAACAACCCAGAAAACATCCGTGTAGGTTCAACCCTTTCCACTG
ACGAATTCTCATCTAATCGCTTCGATTTCATGCTCTCTAACCCGCCTTATGGTAAGAGCTGGGCGAGTGAGCAAAAGCAC
ATCAAAGAAGGCAAAGAAGTCGTTGATGGTCGCTTTAAAGTGAAGTTAAAAGATTACTGGGGTGTAGAGAGCGAGCAAGA
AGCGATACCACGCTCAAGTGATGGCCAGTTACTGTTCCTGATGGAAATGGTCACCAAAATGAAGTCGCCGCAAGACAGCC
CATTGGGTTCACGCATTGCGTCCGTTCACAATGGTTCAAGCTTGTTTACCGGTGATGCGGGTAGTGGTGAAAGTAATATT
CGTCGTTTCATCATAGAAAATGACATGCTGGATGCGATTGTTCAGTTGCCAAACAACCTGTTCTACAACACGGGTATTAC
CACGTACATCTGGCTGCTCAATAACAACAAACCTGAAAATCGCCAAGGCAAAGTGCAGCTGATTGATGCTAGCTTACTGT
TCCGTAAGTTGCGTAAGAACTTGGGTAATAAAAACTGCGAATTTTCGCCAGAGCACATTGCGGAAATTGTCTCGACCTAT
CTTGAGAATCAATCTGTTGAACGTGCTATTGATGAGAAAGGCGATCCGGTCGGTATTGCCGCGCAAGTATTCAAGAACCA
AGATTTTGGTTACTACAAAGTCAATATTGAGCGCCCAGATCGCCGAAATGCCCAATTCCGCGCTGACTTAATTGAGCCGT
TACGTTTTGAAAACTCACAGCGTGAAGTCATGGAGTACTTGTACGCCGAATATGGCGAGCAAGTCTATGACGCAGGTTTT
GTTAAAGGGATTGAAAAAGAGATCACCAAGTGGTGTGAAGAAAATGATATCAGCCTAAACAAAGCGGCAAAAACCAAGTT
GCTGGATACGAAAAACTGGATTAAACAACGCACACTGGTGAATGTAGCGAGTCAATTACACAAAAAGATCGGTGACGAAG
TTTACAACGACTTTAACCAGTTCAAACAATTAGTAGATGCAGAACTTACATCACTCGGCCTTAAGCTTTCAGCACCAGAA
AAGAAAGCCATCTTGGATGCGGTAAGCTGGTATGACGAAAATGCAGAAAAAGTCATCAAGAAAGTCGCCAAGCTAAAGCA
AGATAAGTTAGACGAACTGCTAGAAAACTACGAATGTGAACTGCAAGATTTGCCAGATTTCGGGTACTACCCAACGGGCA
ACCACAACGAGTTCGTGACTTATGAATCAAGTTCAGACTTGCGTGATAGCGAATCCGTTCCACTTGAGCAAAGCATTTAC
CAATACTTCCTTGATGAAGTAAAGCCGCATGTAGATGAAGCTTGGATAAATCTTGAATCAGTCAAGATTGGTTATGAGAT
CAGCTTTAACAAGTACTTCTATCGCCATAAGCCACTGCGCTCAATGGATGAGGTCGCTGGTGACATTATTGCGCTTGAAC
AAAAAGCGGAAGGCTTAATTGCTGACATTTTGGGCATCTCTGTGGCTAAGGTTCAGGGGTAA
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| Protein sequence : | |
MDHSVHNKLVSFIWSIADDCLRDVYVRGKYRDVILPMVVLRRLDTLLEPSKEAVLEEVRFQKEEMNEIELDDAPLCATSG
YVFYNTSKWTLQTLFSTATNNQQILLANFEDYLNGFSENVKEIVECFNLKAQIRHMAGKDVLLDVVEKFVSPYINLTPAV
KEDPEGNKLPALSNLGMGYVFEELIRKFNEENNEEAGEHFTPREVIELMTHLVFDPIKDNLPLSITVYDPACGSGGMLTE
TQNFVEEKYPASNRDIYLYGKEINDETYAICKSDMMIKGNNPENIRVGSTLSTDEFSSNRFDFMLSNPPYGKSWASEQKH
IKEGKEVVDGRFKVKLKDYWGVESEQEAIPRSSDGQLLFLMEMVTKMKSPQDSPLGSRIASVHNGSSLFTGDAGSGESNI
RRFIIENDMLDAIVQLPNNLFYNTGITTYIWLLNNNKPENRQGKVQLIDASLLFRKLRKNLGNKNCEFSPEHIAEIVSTY
LENQSVERAIDEKGDPVGIAAQVFKNQDFGYYKVNIERPDRRNAQFRADLIEPLRFENSQREVMEYLYAEYGEQVYDAGF
VKGIEKEITKWCEENDISLNKAAKTKLLDTKNWIKQRTLVNVASQLHKKIGDEVYNDFNQFKQLVDAELTSLGLKLSAPE
KKAILDAVSWYDENAEKVIKKVAKLKQDKLDELLENYECELQDLPDFGYYPTGNHNEFVTYESSSDLRDSESVPLEQSIY
QYFLDEVKPHVDEAWINLESVKIGYEISFNKYFYRHKPLRSMDEVAGDIIALEQKAEGLIADILGISVAKVQG
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