Name : VC1758 (VC1758)
Accession : NP_231394.1
PAI name : VPI-2
PAI accession : NC_002505_P5
Strain : Vibrio cholerae IEC224
Virulence or Resistance: Not determined
Product : phage family integrase
Function : -
Note : similar to GB:U02372 PID:498253 PID:1100883; identified by sequence similarity
Homologs in the searched genomes : 203 hits ( 202 protein-level, 1 DNA-level )
Publication :
-Heidelberg,J.F., Eisen,J.A., Nelson,W.C., Clayton,R.A., Gwinn,M.L., Dodson,R.J., Haft,D.H., Hickey,E.K., Peterson,J.D., Umayam,L.A., Gill,S.R., Nelson,K.E., Read,T.D., Tettelin,H., Richardson,D., Ermolaeva,M.D., Vamathevan,J., Bass,S., Qin,H., Dragoi,I., , "DNA sequence of both chromosomes of the cholera pathogen Vibrio cholerae", Nature 406 (6795), 477-483 (2000) PUBMED 10952301.
-Heidelberg,J.F., Eisen,J.A., Nelson,W.C., Clayton,R.A., Gwinn,M.L., Dodson,R.J., Haft,D.H., Hickey,E.K., Peterson,J.D., Umayam,L.A., Gill,S.R., Nelson,K.E., Read,T.D., Tettelin,H., Richardson,D., Ermolaeva,M.D., Vamathevan,J., Bass,S., Qin,H., Dragoi,I., , "Direct Submission", Submitted (18-SEP-2001) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
-Heidelberg,J.F., Eisen,J.A., Nelson,W.C., Clayton,R.A., Gwinn,M.L., Dodson,R.J., Haft,D.H., Hickey,E.K., Peterson,J.D., Umayam,L.A., Gill,S.R., Nelson,K.E., Read,T.D., Tettelin,H., Richardson,D., Ermolaeva,M.D., Vamathevan,J., Bass,S., Qin,H., Dragoi,I., , "Direct Submission", Submitted (14-JUN-2000) The Institute for Genomic Research, 9712 Medical Center Dr, Rockville, MD 20850, USA.
| DNA sequence : | |
ATGGCAAATAATCTAACCGCAAGGCAAATTCAAACCGCAAAACCTAAGGATAAGCTTTATCGTTTATCTGATGGCGGCAA
TCTCTACTTTTGCGTACGTCCAAGCAATTCTCGCTCATGGCAATTCCGTTATAAACGACCAGGACAAGATAAGATCACTT
ATCTTTCGTTTGGAACCTATCCCGATATGTCTTTGGCGGAAGCTCGAGAGAAAGCCCTTGAGGCTCGCAAGCAGTTAGCG
GATGGTATTGACCCTCAACTCGCTAAAGAAGAACAAAAAGCAAAAACCATTACTGAACAAAATGCGACGTTCAAGTTTGT
CGCTGAGCAATGGAAGGCTACGAAGGAAGGACAAATAAAAGAGAAGACACTGGAAGGGAATTGGCGAAAACTTGAACTTT
ATGCCTTTCCCAAATTGGGCTCGATACCCGTTAGTAAACTTACTGCGCCGATGGCCATCGCTGCATTACGGCCAATAGAG
TCTCAAGGATTACTAGAAACTGTAAAACGCACCGCCCAACTTATGAATGAAATCATGAACTATGCGGTAAATAGCGGTGT
CATTCATGCTAACCCATTAGCTGGCATCCGTGATGTGTTTAAAAAACACAAAGTGGTGCACATGAAAGCCCTGCAACCAC
ATGAAATGCATGATCTTATACGCACCGTTGCTACAGCAAATATCCAGCATGTGACACGATTTTTAATTGAATGGCAACTT
CACACCATGGTTCGGCCTAACGAAGCCTCTGGTGCTCGTTGGGAAGAAATCGACATGGTTAATAAGCTTTGGATTATCCC
TAAAGAGCGAATGAAGATGAACCGCGAGCACGTAGTCCCACTGACAGCACAAACATTGGCTATTCTTGAAGCGATTAAGC
CCATCAGTGGTCATAGAGAATTCATTTTCCCATCTAGCCGTAATCCAAAGGTACCCACCGATTCTGAAACCGCTAATAAA
GCACTTGGCAGAATGGGATTTAAGGATAGAACGACCGCGCACGGTCTTCGTGCTTTGGCAAGTACCACTCTTAATGAACA
GGGCTTTGAACCTGATGTCATTGAAGCCGCATTGGCTCATACTGACAAAAACCAAATACGCAAAGCATACAACCGTACCG
ACTATTTAGACTCTCGTCGAAAGCTTATGAGCTGGTGGAGTGAGCATATCGAAAAATCTAGCTATGGAAGTTACAGTGTG
GCTGGTACTGGATATTTGCACTTACTGAAAGCCTAA
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| Protein sequence : | |
MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYPDMSLAEAREKALEARKQLA
DGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKEKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIE
SQGLLETVKRTAQLMNEIMNYAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQL
HTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREFIFPSSRNPKVPTDSETANK
ALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHTDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSV
AGTGYLHLLKA
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