Name : VC0185 (VC0185)
Accession : NP_229842.1
PAI name : VSP-1
PAI accession : NC_002505_P1
Strain : Vibrio cholerae IEC224
Virulence or Resistance: Not determined
Product : transposase
Function : -
Note : similar to SP:P06696 PID:581277 PID:154921; identified by sequence similarity
Homologs in the searched genomes : 7 hits ( 6 protein-level, 1 DNA-level )
Publication :
-Heidelberg,J.F., Eisen,J.A., Nelson,W.C., Clayton,R.A., Gwinn,M.L., Dodson,R.J., Haft,D.H., Hickey,E.K., Peterson,J.D., Umayam,L.A., Gill,S.R., Nelson,K.E., Read,T.D., Tettelin,H., Richardson,D., Ermolaeva,M.D., Vamathevan,J., Bass,S., Qin,H., Dragoi,I., , "DNA sequence of both chromosomes of the cholera pathogen Vibrio cholerae", Nature 406 (6795), 477-483 (2000) PUBMED 10952301.
-Heidelberg,J.F., Eisen,J.A., Nelson,W.C., Clayton,R.A., Gwinn,M.L., Dodson,R.J., Haft,D.H., Hickey,E.K., Peterson,J.D., Umayam,L.A., Gill,S.R., Nelson,K.E., Read,T.D., Tettelin,H., Richardson,D., Ermolaeva,M.D., Vamathevan,J., Bass,S., Qin,H., Dragoi,I., , "Direct Submission", Submitted (18-SEP-2001) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
-Heidelberg,J.F., Eisen,J.A., Nelson,W.C., Clayton,R.A., Gwinn,M.L., Dodson,R.J., Haft,D.H., Hickey,E.K., Peterson,J.D., Umayam,L.A., Gill,S.R., Nelson,K.E., Read,T.D., Tettelin,H., Richardson,D., Ermolaeva,M.D., Vamathevan,J., Bass,S., Qin,H., Dragoi,I., , "Direct Submission", Submitted (14-JUN-2000) The Institute for Genomic Research, 9712 Medical Center Dr, Rockville, MD 20850, USA.
| DNA sequence : | |
TTGGAGACTGGTATGGTTACTGTCGTAAATTCGAACAATTTTGACGTTCCCCGAATCTATCCGCCTTCAAGTAAATCAAC
ATCTATTCATCTAACTGGGTTTCCTACCTTTTACTCCAAAGACCACGAATACCTGCTCCCGGTGAACCTCTGGTTCAATT
ACTTGGTGAATATTCGAAAAGCAGTCGATATAACAGCAAGTGTTCGCGCCCTTAAGAGATATTGGCAGTTCTTAGAAACC
AATAATTATTCCTGGGATAATTTTCCAGCAAACGATTATCTAAAACCCACCTATAGATTCAGAAATGATGACCTATTAAA
AGCAGCAAGAAGCGGAGAGATCGCTTTTTCTACAGCATCTATGTACATTCTTCATGTCATCAAATTCTATGAATGGGCAG
CTCATGAGAGATTTATAACTTTTACTGAAGAGAACAAACCATTTAATTATCAGATAGTCCATATAGCTAACTCAGGGATG
ATGAGCCACAACAACCCTAGGTTTACAGTACGTTCAACTGACCTCAGAATCAGAAAACCAGCAAGAAACGAACAACAAAA
ACTCAATCCATTATCTCAACAAGAACTACTATTTTTCGCTGACTGCCTTAAAGAATGTTCCGACGAATTTATCATTCATC
AATTACTCCAAATACAGTCTGGATTGCGCGTTGAAGAAGCTTGTACATTTCCATTTTCTATTGTTGAGATGCCTAACCCT
CATATTCATAGATATGAAGTAGAAATTGGTATTCACAATGGTGTACACACAAAATTCAACAAAACACGTAAAGTCGAAAT
ACCCAACCAGCTAATGCGAAAAATGTATGATTACTCGGTTAGTGAACGTCGACTAAAGCGAGAAAAGAAAACAGATGGTG
TAAATAAAACACTACTTCTGAATAATCTTGGAAACCCTCTTTGCAGCAATAACATCCAACAACATTTTCGTCGATTAAGA
CATCATATTCAAAATAAACATAATATTGTTTTTAGTCATCGGACTCACGATTTAAGGGCTACTTATGGTACCTATCGCTT
GGATTCATTGTTGGATCACCTTCCAGTTGGTGATGCTTTAGCTTTAATTATGGGATGGATGGGGCACAAAGATGATAAAA
CCACATGGAAATACCTTCGATATTTAAGAAAAGAAAAAGCAAATCAAAATGCGATTGTAATGCTTGACCAAATATTGGAG
GAAGCAATGCTATGA
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| Protein sequence : | |
METGMVTVVNSNNFDVPRIYPPSSKSTSIHLTGFPTFYSKDHEYLLPVNLWFNYLVNIRKAVDITASVRALKRYWQFLET
NNYSWDNFPANDYLKPTYRFRNDDLLKAARSGEIAFSTASMYILHVIKFYEWAAHERFITFTEENKPFNYQIVHIANSGM
MSHNNPRFTVRSTDLRIRKPARNEQQKLNPLSQQELLFFADCLKECSDEFIIHQLLQIQSGLRVEEACTFPFSIVEMPNP
HIHRYEVEIGIHNGVHTKFNKTRKVEIPNQLMRKMYDYSVSERRLKREKKTDGVNKTLLLNNLGNPLCSNNIQQHFRRLR
HHIQNKHNIVFSHRTHDLRATYGTYRLDSLLDHLPVGDALALIMGWMGHKDDKTTWKYLRYLRKEKANQNAIVMLDQILE
EAML
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