Name : HP0547 (HP0547)
Accession : NP_207343.1
PAI name : cag PAI
PAI accession : NC_000915_P1
Strain : Helicobacter pylori 2017
Virulence or Resistance: Virulence
Product : cag pathogenicity island protein (cag26)
Function : -
Note : similar to GP:1752700 percent identity: 92.87; identified by sequence similarity
Homologs in the searched genomes : 48 hits ( 47 protein-level, 1 DNA-level )
Publication :
-Marais,A., Mendz,G.L., Hazell,S.L. and Megraud,F., "Metabolism and genetics of Helicobacter pylori: the genome era", Microbiol. Mol. Biol. Rev. 63 (3), 642-674 (1999) PUBMED 10477311.
-Raymond,J., Thiberge,J.M., Kalach,N., Bergeret,M., Dupont,C., Labigne,A. and Dauga,C., "Using macro-arrays to study routes of infection of Helicobacter pylori in three families", PLoS ONE 3 (5), E2259 (2008) PUBMED 18493595 REMARK Publication Status: Online-Only.
-Tomb,J.-F., White,O., Kerlavage,A.R., Clayton,R.A., Sutton,G.G., Fleischmann,R.D., Ketchum,K.A., Klenk,H.P., Gill,S., Dougherty,B.A., Nelson,K., Quackenbush,J., Zhou,L., Kirkness,E.F., Peterson,S., Loftus,B., Richardson,D., Dodson,R., Khalak,H.G., Glodek,, "The complete genome sequence of the gastric pathogen Helicobacter pylori", Nature 388 (6642), 539-547 (1997) PUBMED 9252185.
-Tomb,J.-F., White,O., Kerlavage,A.R., Clayton,R.A., Sutton,G.G., Fleischmann,R.D., Ketchum,K.A., Klenk,H.P., Gill,S., Dougherty,B.A., Nelson,K., Quackenbush,J., Zhou,L., Kirkness,E.F., Peterson,S., Loftus,B., Richardson,D., Dodson,R., Khalak,H.G., Glodek,, "Direct Submission", Submitted (18-SEP-2001) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
-Tomb,J.-F., White,O., Kerlavage,A.R., Clayton,R.A., Sutton,G.G., Fleischmann,R.D., Ketchum,K.A., Klenk,H.P., Gill,S., Dougherty,B.A., Nelson,K., Quackenbush,J., Zhou,L., Kirkness,E.F., Peterson,S., Loftus,B., Richardson,D., Dodson,R., Khalak,H.G., Glodek,, "Direct Submission", Submitted (06-AUG-1997) The Institute for Genomic Research, 9712 Medical Center Dr, Rockville, MD 20850, USA.
-Wen,Y., Marcus,E.A., Matrubutham,U., Gleeson,M.A., Scott,D.R. and Sachs,G., "Acid-adaptive genes of Helicobacter pylori", Infect. Immun. 71 (10), 5921-5939 (2003) PUBMED 14500513.
| DNA sequence : | |
ATGACTAACGAAACTATTGATCAAACAAGAACACCAGATCAAACACAAAGCCAAACAGCTTTTGATCCGCAACAATTTAT
CAATAATCTTCAAGTGGCTTTTATTAAAGTTGATAATGTTGTCGCTTCATTTGATCCTGATCAAAAACCAATCGTTGATA
AGAACGATAGGGATAACAGGCAAGCTTTTGATGGAATCTCGCAATTAAGGGAAGAATACTCCAATAAAGCGATCAAAAAT
CCTACCAAAAAGAATCAGTATTTTTCAGACTTTATCGATAAGAGCAATGATTTAATCAACAAAGACAATCTCATTGATGT
AGAATCTTCCACAAAGAGCTTTCAGAAATTTGGGGATCAGCGTTACCAAATTTTCACAAGTTGGGTGTCCCATCAAAAAG
ATCCGTCTAAAATCAACACCCGATCGATCCGAAATTTTATGGAAAATATCATACAACCCCCTATCCCTGATGATAAAGAA
AAAGCAGAGTTTTTGAAATCTGCCAAACAATCTTTTGCAGGAATCATTATAGGGAATCAAATCCGAACGGATCAAAAGTT
CATGGGCGTGTTTGATGAATCCTTGAAAGAAAGGCAAGAAGCAGAAAAAAATGGAGGGCCTACTGGTGGGGATTGGTTGG
ATATTTTTCTCTCATTTATATTTAACAAAAAACAATCTTCCGATGTCAAAGAAGCAATCAATCAAGAACCAGTTCCCCAT
GTCCAACCAGATATAGCCACTACTACCACCGACATACAAGGCTTACCGCCTGAAGCTAGGGATTTACTTGATGAAAGGGG
TAATTTTTCTAAATTCACTCTTGGCGATATGGAAATGTTAGATGTTGAGGGAGTCGCTGACATTGATCCTAATTACAAGT
TCAATCAATTATTGATTCACAATAACGCTCTGTCTTCTGTGTTAATGGGGAGTCATAATGGCATAGAACCTGAAAAAGTT
TCATTATTGTATGCGGGCAATGGTGGTTTTGGAGACAAACACGATTGGAACGCCACCGTTGGTTATAAAGACCAACAAGG
TAACAATGTGGCTACACTCATTAATGTGCATATGAAAAACGGCAGTGGCTTAGTCATAGCAGGTGGTGAGAAAGGGATTA
ATAACCCTAGTTTTTATCTCTACAAAGAAGACCAACTCACAGGCTCACAACGAGCATTGAGTCAAGAAGAGATCCGAAAC
AAAGTAGATTTCATGGAATTTCTTGCACAAAATAATACTAAATTAGACAACTTGAGCGAGAAAGAGAAAGAAAAATTCCA
AAATGAGATTGAAGATTTTCAAAAAGACTCTAAGGCTTATTTAGACGCCCTAGGGAATGATCGTATTGCTTTTGTTTCTA
AAAAAGACACAAAACATTCAGCTTTAATTACTGAGTTTAATAATGGGGATTTGAGCTACACTCTCAAAGATTATGGGAAA
AAAGCAGATAAAGCTTTAGATAGGGAGAAAAATGTTACTCTTCAAGGTAGCCTAAAACATGATGGCGTGATGTTTGTTGA
TTATTCTAATTTCAAATACACCAACGCCTCCAAGAATCCCAATAAGGGTGTAGGCGCTACGAATGGCGTTTCCCATTTAG
AAGCAGGCTTTAACAAGGTAGCTGTCTTTAATTTGCCTGATTTAAATAATCTCGCTATCACTAGTTTCGTAAGGCGGAAT
TTAGAGAATAAACTAACCGCTAAAGGATTGTCCCTACAAGAAGCTAATAAGCTCATCAAAGACTTTTTGAGCAGCAACAA
AGAATTGGCTGGAAAAGCTTTAAACTTCAATAAAGCTGTAGCTGAAGCTAAAAGCACAGGCAACTATGACGAGGTGAAAA
AAGCTCAGAAAGATCTTGAAAAATCCCTAAGGAAACGAGAGCATTTGGAGAAAGAAGTAGAGAAAAAATTGGAGAGCAAA
AGCGGCAACAAAAATAAAATGGAAGCAAAAGCTCAAGCTAACAGCCAAAAAGATGAGATTTTTGCGTTGATCAATAAAGA
GGCTAATAGGGATGCAAGAGCAATCGCTTACACTCAAAATCTTAAAGGCATCAAAAGGGAATTGTCTGATAAACTTGAAA
AAATCAGCAAGGATTTGAAAGACTTTAGTAAATCTTTTGATGAATTCAAAAATGGCAAAAATAAGGATTTCAGCAAGGCA
GAAGAAACGCTAAAAGCCCTTAAAGGCTCGGTGAAAGATTTAGGTATCAATCCAGAATGGATTTCAAAAGTTGAAAACCT
TAATGCAGCTTTGAATGAATTCAAAAATGGCAAAAATAAGGATTTCAGCAAGGTAACGCAAGCAAAAAGCGACCTTGAAA
ATTCCGTTAAAGATGTGATCATCAATCAAAAGGTAACGGATAAAGTTGACAATCTCAATCAAGCGGTATCAGTGGCTAAA
GCAATGGGCGATTTCAGTAGGGTAGAGCAAGTGTTAGCCGATCTCAAAAACTTCTCAAAGGAGCAATTGGCTCAACAAGC
TCAAAAAAATGAAGATTTCAATACTGGAAAAAATTCTGAACTATACCAATCCGTTAAGAATAGTGTAAATAAAACCCTAG
TCGGTAATGGGTTATCTGGAATAGAGGCCACAGCTCTCGCCAAAAATTTTTCGGATATCAAGAAAGAATTGAATGAGAAA
TTTAAAAATTTCAATAACAATAATAATGGACTCAAAAACAGCACAGAACCCATTTATGCTAAAGTTAATAAAAAGAAAAC
AGGACAAGTAGCTAGCCCTGAAGAACCCATTTATACTCAAGTTGCTAAAAAGGTAAATGCAAAAATTGACCGACTCAATC
AAATAGCAAGTGGTTTGGGTGGTGTAGGGCAAGCAGCGGGCTTCCCTTTGAAAAGGCATGATAAAGTTGATGATCTCAGT
AAGGTAGGGCTTTCAGCTAGCCCTGAACCCATTTACGCTACGATTGATGATCTCGGCGGACCTTTCCCTTTGAAAAGGCA
TGATAAAGTTGATGATCTCAGTAAGGTAGGGCGATCAAGGAATCAAGAATTGGCTCAGAAAATTGACAATCTCAATCAAG
CGGTATCAGAAGCTAAAGCAGGTTTTTTTGGCAACCTAGAGCAAACGATAGACAAGCTCAAAGATTCTACAAAAAAGAAT
GTTATGAATCTATATGTTGAAAGTGCAAAAAAAGTGCCTGCTAGTTTGTCAGCGAAATTGGACAATTATGCTATTAACAG
CCACACACGCATTAATAGCAATATCCAAAATGGAGCAATCAATGAAAAAGCGACCGGTATGCTAACGCAAAAAAACCCTG
AGTGGCTTAAGCTCGTGAATGATAAGATAGTTGCGCATAATGTGGGAAGCGTTTCTTTGTCAGAGTATGATAAAATTGGC
TTCAACCAGAAGAATATGAAAGATTATTCTGATTCGTTCAAGTTTTCCACCAAGTTGAACAATGCTGTAAAAGACATTAA
GTCTGGCTTTACGCACTTTTTAGCCAATGCATTTTCTACAGGATATTACTGCTTGGCGAGGGAAAATGCGGAGCATGGAA
TCAAAAATGTTAATACAAAAGGTGGTTTCCAAAAATCTTAA
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| Protein sequence : | |
MTNETIDQTRTPDQTQSQTAFDPQQFINNLQVAFIKVDNVVASFDPDQKPIVDKNDRDNRQAFDGISQLREEYSNKAIKN
PTKKNQYFSDFIDKSNDLINKDNLIDVESSTKSFQKFGDQRYQIFTSWVSHQKDPSKINTRSIRNFMENIIQPPIPDDKE
KAEFLKSAKQSFAGIIIGNQIRTDQKFMGVFDESLKERQEAEKNGGPTGGDWLDIFLSFIFNKKQSSDVKEAINQEPVPH
VQPDIATTTTDIQGLPPEARDLLDERGNFSKFTLGDMEMLDVEGVADIDPNYKFNQLLIHNNALSSVLMGSHNGIEPEKV
SLLYAGNGGFGDKHDWNATVGYKDQQGNNVATLINVHMKNGSGLVIAGGEKGINNPSFYLYKEDQLTGSQRALSQEEIRN
KVDFMEFLAQNNTKLDNLSEKEKEKFQNEIEDFQKDSKAYLDALGNDRIAFVSKKDTKHSALITEFNNGDLSYTLKDYGK
KADKALDREKNVTLQGSLKHDGVMFVDYSNFKYTNASKNPNKGVGATNGVSHLEAGFNKVAVFNLPDLNNLAITSFVRRN
LENKLTAKGLSLQEANKLIKDFLSSNKELAGKALNFNKAVAEAKSTGNYDEVKKAQKDLEKSLRKREHLEKEVEKKLESK
SGNKNKMEAKAQANSQKDEIFALINKEANRDARAIAYTQNLKGIKRELSDKLEKISKDLKDFSKSFDEFKNGKNKDFSKA
EETLKALKGSVKDLGINPEWISKVENLNAALNEFKNGKNKDFSKVTQAKSDLENSVKDVIINQKVTDKVDNLNQAVSVAK
AMGDFSRVEQVLADLKNFSKEQLAQQAQKNEDFNTGKNSELYQSVKNSVNKTLVGNGLSGIEATALAKNFSDIKKELNEK
FKNFNNNNNGLKNSTEPIYAKVNKKKTGQVASPEEPIYTQVAKKVNAKIDRLNQIASGLGGVGQAAGFPLKRHDKVDDLS
KVGLSASPEPIYATIDDLGGPFPLKRHDKVDDLSKVGRSRNQELAQKIDNLNQAVSEAKAGFFGNLEQTIDKLKDSTKKN
VMNLYVESAKKVPASLSAKLDNYAINSHTRINSNIQNGAINEKATGMLTQKNPEWLKLVNDKIVAHNVGSVSLSEYDKIG
FNQKNMKDYSDSFKFSTKLNNAVKDIKSGFTHFLANAFSTGYYCLARENAEHGIKNVNTKGGFQKS
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