Name : tnpA
Accession : CAJ31329.1
PAI name : cag PAI
PAI accession : AM086403
Strain : Helicobacter pylori 2017
Virulence or Resistance: Not determined
Product : insertion sequence IS606 transposase homolog A
Function : -
Note : -
Homologs in the searched genomes : 39 hits ( 37 protein-level, 2 DNA-level )
Publication :
-Kraft,C., "Direct Submission", Submitted (16-SEP-2005) Kraft C., Medical Microbiology, Hannover Medical School, Carl Neuberg Str. 1, 30625 Hannover, D-30625, GERMANY.
-Kraft,C., Stack,A., Josenhans,C., Niehus,E., Dietrich,G., Correa,P., Fox,J.G., Falush,D. and Suerbaum,S., "Genomic changes during chronic Helicobacter pylori infection", J. Bacteriol. 188 (1), 249-254 (2006) PUBMED 16352841.
| DNA sequence : | |
ATGAAAGTCAATAAGGGTTTTAAATTCCGCTTGTATCCCACTAAAGAACAACAAGATAAATTGCAACACTGCTTTTTTGT
CTATAATCAAGCTTATAATATTGGCTTGAATTTACTGCAAGAGCAATATGAAACCAACAAAGATTCACCTCCCAAAGAAA
GAAAGTGGAAAAAATCAAGCGAGTTAGACAAAGCGATTAAACACCACTTGAACGCTAGGGGGTTAAGCTTTAGTAGTGTG
ATAGCCCAACAATCACGCATGAATGTTGAAAGGGCTTTAAAGGATGCTTTTAAAGTTAAAGATAGGGGATTTCCTAAATT
CAAGAACTCTAAATCCGCTAAACAATCTTTTTCATGGAACAATCAAGGTTTCTCTATTAAGGATAGCGATGAGGAACGCT
TTAAGATATTCACTTTAATGAAAATGCCCTTAATGATGCGCATGCATAGAGACTTCCCCCCTCATTCTAAAGTGAAACAA
ATCGTGATCTCTTGCAGCCATAGAAAATATTTCGTTAGCTTTAGCGTGGAATACGAACAAGACATTACTCCCATCAAAAA
CCCTAAAAATGGTGTGGGGCTAGATTTGAATATCCTTGATATAGCTTGTTCTTGTGGCGTGAATAATCACAAAAAACTAA
CGGACTTTAAGCAATACCCAACAGACATGAAAGAATTACTAGGGATAGAAATAGATGAAGAGTTGGACACTAAACGACTC
ATCCCTACTTATTCCAAATTATATTCTTTAAAAAAATACTCTAAAAAATTTAAAAGATTGCAAAGAAAACAAAGCCGTAG
GGTGTTAAAGTCTAAACAAAACAAAACCAAATTAGGAGGTAATTTTTACAAAACCCAAAAGAAATTAAACCAAGCCTTTG
ACAAGTCTAGTCATCAAAAAACAGACAGATACCATAAAATCACAAACGAACTTTCAAGGCAATTTGAATTGATAGTAGTT
GAAGATTTGCAAGTAAAAAACATGACTAAAAGAGCTAAACTCAAAAACGTTAAACAAAAGAGTGGGCTTAATCAATCTAT
TTTAAATACTTCATTCTATCAAATCATCTCTTTTTTAGACTACAAACAACAGCATAATGGCAAATTGTTAGTGAAAGTTC
CCCCACAATATACGAGTAAAACTTGCCATTGTTGTGGGAATATCAACCACAAGCTTAAATTAAATCATAGGCAGTATTGG
TGTTTAGAATGCGGGTATAGAGAACACAGAGACATCAACGCTGCGAACAATATTTTAAGCAAAGGGTTAAGTCTTTTTGG
GGTAGGAAATATCCATGCAGACTTTAAAGAACAAAGCCTTTCGTGTTAG
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| Protein sequence : | |
MKVNKGFKFRLYPTKEQQDKLQHCFFVYNQAYNIGLNLLQEQYETNKDSPPKERKWKKSSELDKAIKHHLNARGLSFSSV
IAQQSRMNVERALKDAFKVKDRGFPKFKNSKSAKQSFSWNNQGFSIKDSDEERFKIFTLMKMPLMMRMHRDFPPHSKVKQ
IVISCSHRKYFVSFSVEYEQDITPIKNPKNGVGLDLNILDIACSCGVNNHKKLTDFKQYPTDMKELLGIEIDEELDTKRL
IPTYSKLYSLKKYSKKFKRLQRKQSRRVLKSKQNKTKLGGNFYKTQKKLNQAFDKSSHQKTDRYHKITNELSRQFELIVV
EDLQVKNMTKRAKLKNVKQKSGLNQSILNTSFYQIISFLDYKQQHNGKLLVKVPPQYTSKTCHCCGNINHKLKLNHRQYW
CLECGYREHRDINAANNILSKGLSLFGVGNIHADFKEQSLSC
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