Name : unnamed
Accession : CAC39288.1
PAI name : LPA
PAI accession : AJ278144
Strain : Escherichia coli 042
Virulence or Resistance: Not determined
Product : hypothetical protein
Function : -
Note : ORF9
Homologs in the searched genomes : 59 hits ( 59 protein-level )
Publication :
-Schmidt,H., Zhang,W.L., Hemmrich,U., Jelacic,S., Brunder,W., Tarr,P.I., Dobrindt,U., Hacker,J. and Karch,H., "Identification and characterization of a novel genomic island integrated at selC in locus of enterocyte effacement-negative, Shiga toxin-producing Escherichia coli", Infect. Immun. 69 (11), 6863-6873 (2001) PUBMED 11598060.
-Zhang,W.L., "Direct Submission", Submitted (22-MAY-2000) Zhang W.L., Institut fuer Hygiene und Mikrobiologie, Universitaet Wuerzburg, Josef-Schneider-Str. 2, D-97080, GERMANY.
| DNA sequence : | |
ATGCGAATAACCACTCTGGCTTCCGTTGTCATTCCCTGTCTCGGGTTTTCAGCCAGCAGCATGGCAGCAGAGGATGTGAT
GATTGTCTCGGCATCCGGCTATGAGAAAAAACTGACCAACGCAGCCGCCAGTGTTTCCGTAATCAGTCAGGAGGAATTGC
AGTCCAGCCAGTACCACGATCTGGCGGAGGCACTGAGAGCTGTGGAGGGTGTGGATGTTGAAAGTGGTACGGGTAAAACC
GGTGGGCTGGAAATCAGCATCCGTGGAATGCCCGCCAGTTACACGCTGATACTGATTGATGGTGTCCGTCAGGGCGGGAG
CGGGGACGTGACGCCTAACGGTTTTTCTGCCATGAATACAGGGTTCATGCCTCCTCTGGCCGCGATTGAGCGTATTGAGG
TTATCAGGGGGCCGATGTCCACACTGTATGGCTCTGATGCGATGGGTGGTGTGGTGAATATCATTACCAAAAAGAATGCA
GACAAATGGCTCTCTTCCGTCAACGCCGGGCTGAATCTGCAGGAGAGTAACAAATGGGGCAACAGCAGCCAGTTTAATTT
CTGGAGCAGTGGCCCTCTTGTGGATGATTCTGTCAGTCTGCAGATCCGCGGCAGCACACAGCAGCGTCAGGGCTCATCGG
TCACATCACTGAGCGACACATCAGCCACGCGTATTCCTTATCCCACGGAGTCACAGAATTATAATCTTGGTGCGCGTATT
GACTGGAAGGCTACGGAGCAGGATGTGCTCTGGTTTGATATGGATACCACCCGACAGCGTTACGATAACCAGGATGGTCA
ACTGGGTAGCCTGACAGGGGGATATGACCATACTCTGCGCTATGAGCGAAACAAAATTTCGGCTGGCTATGATCATACTT
TCACCTTCGGTACCTGGAAATCGTATCTGAACTGGAACGAGACGGAAAATAAAGGTCGTGAGCTTGTACGTAGTGTTCTG
AAGAGCGATAAATGGGGGCTTGCCGGTAAACCGCGGGAGCTTAAGGAATCTAACCTTATCCTGAATTCATTGCTGCTTAC
CCCTCTGGGAGAATCTCATCTGCTTACTGTGGGGGGAGAGTATCAGAGTTCGTCCATGAAAGATGGGGTTGTCCTTGCCA
GCACAGGTGAAACTTTCCGACAGAAAAGCTGGTCAGTATTTGCTGAGGATGAGTGGCATCTCACGGATGTACTTGCGCTG
ACTGCAGGCAGTCGCTATGAACATCATGATCAATTCGGGGGACACTTCAGTCCGCGTGCATATCTGGTCTGGGACGTGAC
CGATGCCTGGACGCTGAAAGGCGGTGTGACCACGGGATATAAAGCCCCCACCATGGGACAGTTACATAAGGGGATCAGCG
GTGTATCCGGGCAGGGACGTACTAATCTACTCGGTAACCCCGAACTGAAGCCGGAAGAGAGTGTAAGTTATGAGGCGGGG
GTATATTACGATAACCTCTCCGGTCTGAATGCCAATATAACAGGCTTTATAACAGACTTCTCCAACAAGATTGTCTCTTA
TTCCATTGATGATAACACCAATAGCTATACAAACAGCGGAAAGGCCCGCTTGCATGGTGTGGAATTCGCCGGCACATTGC
CGCTGTGGTCAGAGGATGTCACTCTGTCGTTGAATTACACCTGGACCCAAAGTGAACAACGTGATGGTGATAACAAAGGT
GCACCGCTGAGTTATACCCCTGAACACATGGTGAATGCGAAACTGAACTGGCAGATCACCGAAGAGGTGGCATCATGGCT
GGGTGCCCGTTATCGCGGGAAAACACCACGTTTCACCCGGAATTATTCGTCGCTGAGCGCTGTACAGAAGAAAGTGTATG
ATGAGAAAGGAGAATATCTGAAAGCCTGGACGGTGGTGGATGCAGGTCTGTCGTGGAAGGTGACGGATGCCCTGACGCTG
AATGCTGCGGTGAATAACCTGCTCAACAAGGATTACAGTGACGTGAGCCTGTACAGTGCCGATAAGAGTACGCTTTATGC
CGGTGATTACTTCCAGACGGGATCATCAACAACGGGATATGTGATACCTGAGCGAAATTACTGGATGTCGCTGAACTATC
AGTTCTGA
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| Protein sequence : | |
MRITTLASVVIPCLGFSASSMAAEDVMIVSASGYEKKLTNAAASVSVISQEELQSSQYHDLAEALRAVEGVDVESGTGKT
GGLEISIRGMPASYTLILIDGVRQGGSGDVTPNGFSAMNTGFMPPLAAIERIEVIRGPMSTLYGSDAMGGVVNIITKKNA
DKWLSSVNAGLNLQESNKWGNSSQFNFWSSGPLVDDSVSLQIRGSTQQRQGSSVTSLSDTSATRIPYPTESQNYNLGARI
DWKATEQDVLWFDMDTTRQRYDNQDGQLGSLTGGYDHTLRYERNKISAGYDHTFTFGTWKSYLNWNETENKGRELVRSVL
KSDKWGLAGKPRELKESNLILNSLLLTPLGESHLLTVGGEYQSSSMKDGVVLASTGETFRQKSWSVFAEDEWHLTDVLAL
TAGSRYEHHDQFGGHFSPRAYLVWDVTDAWTLKGGVTTGYKAPTMGQLHKGISGVSGQGRTNLLGNPELKPEESVSYEAG
VYYDNLSGLNANITGFITDFSNKIVSYSIDDNTNSYTNSGKARLHGVEFAGTLPLWSEDVTLSLNYTWTQSEQRDGDNKG
APLSYTPEHMVNAKLNWQITEEVASWLGARYRGKTPRFTRNYSSLSAVQKKVYDEKGEYLKAWTVVDAGLSWKVTDALTL
NAAVNNLLNKDYSDVSLYSADKSTLYAGDYFQTGSSTTGYVIPERNYWMSLNYQF
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