Name : int
Accession : CAB59975.1
PAI name : HPI
PAI accession : AJ245585
Strain : Escherichia coli 042
Virulence or Resistance: Not determined
Product : integrase
Function : -
Note : ORF with internal deletion
Homologs in the searched genomes : 34 hits ( 27 protein-level, 7 DNA-level )
Publication :
-Karch,H., "Direct Submission", Submitted (10-AUG-1999) Karch H., Institut fuer Hygiene und Mikrobiologie, Universitaet Wuerzburg, Josef-Schneider-Strasse 2, D-97080, GERMANY.
-Karch,H., Schubert,S., Zhang,D., Zhang,W., Schmidt,H., Olschlager,T. and Hacker,J., "A genomic island, termed high-pathogenicity island, is present in certain non-O157 Shiga toxin-producing Escherichia coli clonal lineages", Infect. Immun. 67 (11), 5994-6001 (1999) PUBMED 10531259.
| DNA sequence : | |
ATGTTCCTTACCGACGCAAAAATCCGCACCCTCAAGCCTTCTGATAAACCCTTTAAAGTCTCCGATTCTCACGGTCTGTA
TCTGCTGGTCAAGCCGGGTGGCTCCCGCCACTGGTATCTCAAAGCTGGAGGTTGCGTCCCGCACACGGCAGCACCTGAGT
AACATAATGCGCCATGCGGTCCATCAGGAGTTAATCGATACGAACCCTGCAGCAAACCTTGGCGGCGTGACCACACCTCC
TGTCAGACGGCACTATCCTGCCCTGCCGCTGGAGCGGCTGCCTGAACTGCTTGAACGTATTGGGGCATATCATCAGGGCC
GTGAACTGACCCGGCATGCCGTTCTGCTGATGCTGCATGTGTTCATTCGCTCCAGTGAACTGCGTTTCGCCCGCTGGTCA
GAGATTGATTTCACAAACCGAGTCTGGACGATACCCGCGACGCGAGAACCCATTATTGGCGTGCGTTATTCCGGCCGCGG
GGCAAAAATGCGAATGCCGCATATCGTCCCCCTCTCAGAACAGTCCATCGCCATTCTGAAACAGATTAAGGATATCACCG
GTAATAATGAACTGATCTTCCCCGGCGACCATAACCCGTATAAGCCAATGTGTGAAAACACGGTCAATAAGGCACTGCGG
GTGATGGGTTACGACACGAAAAAGGATATCTGCGGTCACGGCTTCCGGGCAATGGCATGCAGTGCGCTGATGGAATCGGG
TTTATGGGCAAAGGACGCAGTAGAACGCCAGATGAGTCATCAGGAGCGCAATACCGTGCGCATGGCTTATATTCATAAGG
CAGAGCACCTAGAAGCCCGCAAAGCGATGATGCAGTGGTGGTCGGATTATCTGGAAGCATGCCGAGAATCTTATGCGCCG
CCTTATACAATTGGTAAAAATAAGTTTATCCCATAG
|
| Protein sequence : | |
CSLPTQKSAPSSLLINPLKSPILTVCICWSSRVAPATGISKLEVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPP
VRRHYPALPLERLPELLERIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVRYSGRG
AKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKKDICGHGFRAMACSALMESG
LWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMMQWWSDYLEACRESYAPPYTIGKNKFIP
|
|
