Name : tnp
Accession : BAG06206.2
PAI name : Type-VII SCCmec
PAI accession : AB462393
Strain : Staphylococcus aureus 04-02981
Virulence or Resistance: Not determined
Product : transposase for ISSau4-like
Function : -
Note : ORF No.23
Homologs in the searched genomes : 268 hits ( 264 protein-level, 4 DNA-level )
Publication :
-Higuchi,W., Takano,T., Teng,L.J. and Yamamoto,T., "Structure and specific detection of staphylococcal cassette chromosome mec type VII", Biochem. Biophys. Res. Commun. 377 (3), 752-756 (2008) PUBMED 18926798.
-Takano,T., Higuchi,W., Otsuka,T., Baranovich,T., Enany,S., Saito,K., Isobe,H., Dohmae,S., Ozaki,K., Takano,M., Iwao,Y., Shibuya,M., Okubo,T., Yabe,S., Shi,D., Reva,I., Teng,L.J. and Yamamoto,T., "Novel characteristics of community-acquired methicillin-resistant Staphylococcus aureus strains belonging to multilocus sequence type 59 in Taiwan", Antimicrob. Agents Chemother. 52 (3), 837-845 (2008) PUBMED 18086843.
-Yamamoto,T. and Higuchi,W., "Direct Submission", Submitted (28-SEP-2008) Contact:Tatsuo Yamamoto Niigata University Graduate School of Medical and Dental Sciences, Division of Bacteriology, Department of Infectious Disease Control and International Medicine; 757 Ichibanchou, Asahimachidori, Niigata, Nii.
| DNA sequence : | |
GTGGATCAATTAAAAGTAAAATATTCAATCAAATTGATACTAGAAGTATTAAACATACCTAAATCAACATATTACCGATG
GAAAAACAAAACCTATAAAAATGATACTGTAACACAAAAAGTTATTGAATTATGTGAAGCTAACCACTATACCTACGGTT
ATCGTAAGATTACAGCACTGATTAATCAATGTTATACATCACCAATTAATCATAAGAGAGTACAGAGAATTATGCAGAAG
CATCATTTGAACTGCCGAGTTAGACCTAAAAAGACGACAAGGATAGGTAAACCGTATTATAAAACTGACAATTTATTACA
AAGACAATTTAAAGCGAGTTGTCCCATGGAAGTATTAACAACCGATATTACTTATTTACCATTTGGTCATTCTATGTTGT
ATTTATCTTCGATAATGGATATTTATAACGGAGAAATTGTGGCGTATAAAATAGATGATAAACAAGACCAAAGTTTAGTT
AATGATACATTAAATCAAATCGATATACCCGAGGGGTGTATATTACATAGTGATCAAGGCAGCGTTTATACATCTTATGC
TTATTATCAATTATGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCTGATAACGCCCCGATAG
AAAGTTTTCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATCAGCTTAATAGCTCTAATCATATTGTAATAGAT
ATTGTCGAAAAATACATTAAAAACTATAATAATAATCGAATTCAACAAAAACTAGGCTACTTATCTCCTGTAAAATACAG
AGAATTAGCAGCCTAG
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| Protein sequence : | |
MDQLKVKYSIKLILEVLNIPKSTYYRWKNKTYKNDTVTQKVIELCEANHYTYGYRKITALINQCYTSPINHKRVQRIMQK
HHLNCRVRPKKTTRIGKPYYKTDNLLQRQFKASCPMEVLTTDITYLPFGHSMLYLSSIMDIYNGEIVAYKIDDKQDQSLV
NDTLNQIDIPEGCILHSDQGSVYTSYAYYQLCEEKGIIRSMSRKGTPADNAPIESFHSSLKSETFYINNQLNSSNHIVID
IVEKYIKNYNNNRIQQKLGYLSPVKYRELAA
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