Name : unnamed
Accession : BAD24830.1
PAI name : Type-V SCCmec
PAI accession : AB121219
Strain : Staphylococcus aureus 04-02981
Virulence or Resistance: Not determined
Product : hypothetical protein
Function : -
Note : ORF No. V011
Homologs in the searched genomes : 5 hits ( 5 protein-level )
Publication :
-Ito,T., Ma,X.X., Takeuchi,F., Okuma,K., Yuzawa,H. and Hiramatsu,K., "Novel type V staphylococcal cassette chromosome mec driven by a novel cassette chromosome recombinase, ccrC", Antimicrob. Agents Chemother. 48 (7), 2637-2651 (2004) PUBMED 15215121.
-Xue,M.X., Ito,T., Okuma,K. and Hiramatsu,K., "Direct Submission", Submitted (26-SEP-2003) Contact:Teruyo Ito Juntendo University, Department of Bacteriology; Hongo 2-1-1, Bunkyo-ku, Tokyo 113-8421, Japan.
| DNA sequence : | |
GTGAATAAAAATATTACAGCTCTAAAATCTACTGAAAATACTACATATATGCAGTATACGGTTCATATCGATGATCAAAT
TATAAATAATATAAAAGAGTGTACCAAAAAGTTTAAAATTTTGCCTATGGAAGATAAAATTCCATTATCACCGTTGTTAC
AACCAGAATATGCAGGAGAGGTACAAGATTTTATTAGTACATATGAGCAGTTTATGATTAATTTTGGTAAAGTAATATTG
GATAGTCAAGGCATAAAAATACAGTTTGAAAGTGAATCATTAAGTAGTATTCAACGAGGCATTCAAGAACATTGTTACTT
AAATGAGCGAACAAATGACATTGATGTGACTAAAGAATGGTATTTATGCAAATTTTCAAATCAAATATTAGAAGAGGATA
AAAATCAATTGTATAATGCTTTAAAGCAACTCATGAATGATTCTAAAAATAAAAAGCAAGCTTTTCAAGAGGTGTTTAAG
GTTCATATTGATATTTATCTCTACAATAAAGAAAAATCTGAATATAAGTATCAAGTATCTAGTTATTTCAATCTTGTAAA
AGAAAATCCTAAAATAACTTATAAAAAAAGACATTTACAAGAGAAACAAGGTGTCAAGGGTACAACTTTCACGAACAAAT
TAAAATTATTGAACAAAATGTATGGTGTAGATGTTGCAAAATATCAGCCATTTTATAATTCTAATAATCCTGAATATGAA
AGAGGTCAATTTGGTGAAAGATACATTTCTCAAAGATCTAACTATGAATTTAATAGACTTCAATATCAAATTATAGATAT
GTTATCGAAAATACTTGATAAGCATCCATTACCAAAGTCAGATAATAATTATAAACATATTCCAACTATTGAAAAAGCAA
TATTAAGTGGGGATTCTCATAGTTTTTATGAGTATTTTGAAGATATAATGAAAGAAATTATAAGTATGGAAAATTCTTCT
TTAAAGGAAAAATTATTGACTGATTTTACATATCAATCTCAATGTAGATGGTACTCTGAAAGTGAAAAATTAAAATTGCA
ACTTGAAAGTTTTATGCATAAAGTTTTGGAGAGCAATTATTATGAGGGTAACAAATTATATAGAATGTTGTCTCATGCAA
TTGAAGAAACAATCAATGAGGCTGATGAAGATAAGGTTCATTTCAATTATTTTAAAGATTATTTTTTGACAGACGGTGGG
GTGAAGAATTGGGAGCAGATTAGCGAGAAAATTACTGAATTCAATGGTAAAGTTATTAACGATATCCAAAATGAATATAA
TAAGATTCAATTTAATAACGCAAATCGAAATCAGAAACTAAACTTTAATTATTTATACCATTGCTTTGAGTTTAGTAATA
ACTTAGTAAAAGCAAGGGTAAATGGAAATAGAGGTTACATTTTATATTTTGTAGATAAATATAAAATAAAAATGCCCTTT
TTGGATCAATTATTAATCAATTATTTGAATCAAGAAATAGGTCAGGAAAGTATTAATTATAATATGCAAACATTGTTTGA
AAAAGAAAGATATGATAGAAGTAGTACCATTGAAAAATTAGTAGCAACAAGCAAATTTAAGTATGAAAAAGATGATTCAG
ATTTATTCAAACAACTTTTCAATGATGTTGAAAATTCAATAGACAGATTAGGTATTTACTTACTAAATAATGGTATAAAT
TCGAATGATGAAAATGCAAGATATTATAGATCGTTTTTAAAGGAACTTAGTAGAATAAAAAGTAAATTAACGCCATTTTC
TCTTGAAATAAGTAAGTCTAGCGGAAGAGAGCAACATTATCCTGATGATGCTATTGATGATAAAGATGAGAGAAGAAAAA
ATAAAGAAGAAACATATCATGCTTTTGATGATAAAAGCGATATTGACTCCAAATTAAAGAATAAAATAAATGTTTCTATC
GATAATTTATTGTCAGTTAAAATTAAGAGCAATTTGTATGATATTAGTCCAAATACAAAAAAACAATAA
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| Protein sequence : | |
MNKNITALKSTENTTYMQYTVHIDDQIINNIKECTKKFKILPMEDKIPLSPLLQPEYAGEVQDFISTYEQFMINFGKVIL
DSQGIKIQFESESLSSIQRGIQEHCYLNERTNDIDVTKEWYLCKFSNQILEEDKNQLYNALKQLMNDSKNKKQAFQEVFK
VHIDIYLYNKEKSEYKYQVSSYFNLVKENPKITYKKRHLQEKQGVKGTTFTNKLKLLNKMYGVDVAKYQPFYNSNNPEYE
RGQFGERYISQRSNYEFNRLQYQIIDMLSKILDKHPLPKSDNNYKHIPTIEKAILSGDSHSFYEYFEDIMKEIISMENSS
LKEKLLTDFTYQSQCRWYSESEKLKLQLESFMHKVLESNYYEGNKLYRMLSHAIEETINEADEDKVHFNYFKDYFLTDGG
VKNWEQISEKITEFNGKVINDIQNEYNKIQFNNANRNQKLNFNYLYHCFEFSNNLVKARVNGNRGYILYFVDKYKIKMPF
LDQLLINYLNQEIGQESINYNMQTLFEKERYDRSSTIEKLVATSKFKYEKDDSDLFKQLFNDVENSIDRLGIYLLNNGIN
SNDENARYYRSFLKELSRIKSKLTPFSLEISKSSGREQHYPDDAIDDKDERRKNKEETYHAFDDKSDIDSKLKNKINVSI
DNLLSVKIKSNLYDISPNTKKQ
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