Name : HP0548
Accession : BAD13936.1
PAI name : cag PAI
PAI accession : AB120421
Strain : Helicobacter pylori 2017
Virulence or Resistance: Virulence
Product : cag pathogenicity island protein
Function : -
Note : non-methionine initiation codon; probable DNA helicase; similar to H.pylori 26695 gene HP0548, NCTC11638 gene cag-omega
Homologs in the searched genomes : 8 hits ( 8 protein-level )
Publication :
-Azuma,T., Yamakawa,A. and Yamazaki,S., "Direct Submission", Submitted (12-SEP-2003) Takeshi Azuma, University of Fukui Faculty of Medical Sciences, General Medicine Second Department of Internal Medicine; Shimoaizuki 23-3, Matsuoka-cho, Yoshida-gun, Fukui 910-1193, Japan (E-mail:azuma@fmsrsa.fukui-med.ac.jp, Tel:8.
-Azuma,T., Yamakawa,A., Yamazaki,S., Ohtani,M., Ito,Y., Muramatsu,A., Suto,H., Yamazaki,Y., Keida,Y., Higashi,H. and Hatakeyama,M., "Distinct diversity of the cag pathogenicity island among Helicobacter pylori strains in Japan", J. Clin. Microbiol. 42 (6), 2508-2517 (2004) PUBMED 15184428.
| DNA sequence : | |
GTTCAAAAAATCATAGAGCTTTTAGAGCAAATCAATCGCGCTCTTAACCAAAGAAAAATCAGAAAAACCATAGGAATTAT
CACACCTTATAATGCCCAAAAAAGACGCTTGCGATCAGAAGTGGAAAAATGCGACTTCAAGAATTTTGATGAGCTCAAAA
TAGACACTGTGGATGCCTTTCAAGGCGAGGAGGCAGATATTATTATTTATTCCACCGTGAAAACTTATGGTAATCTTTCT
TTCTTGCTAGATTCTAAACGCTTGAATGTCGCTATTTCTAGGGCAAAAGAAAATCTCATTTTTGTGGGTAAAAAGTCTTT
CTTTGAGAATTTGCGAAGCGATGAGAAGAATATCTTTAACGCTATTTTGCAAGTCTGCAGATAG
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| Protein sequence : | |
MQKIIELLEQINRALNQRKIRKTIGIITPYNAQKRRLRSEVEKCDFKNFDELKIDTVDAFQGEEADIIIYSTVKTYGNLS
FLLDSKRLNVAISRAKENLIFVGKKSFFENLRSDEKNIFNAILQVCR
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