Name : HP0522
Accession : BAD13883.1
PAI name : cag PAI
PAI accession : AB120420
Strain : Helicobacter pylori 2017
Virulence or Resistance: Virulence
Product : cag pathogenicity island protein
Function : -
Note : similar to H.pylori 26695 gene HP0522:cag3, J99 gene JHP0471, NCTC11638 gene ORF8:cag-delta
Homologs in the searched genomes : 46 hits ( 46 protein-level )
Publication :
-Azuma,T., Yamakawa,A. and Yamazaki,S., "Direct Submission", Submitted (12-SEP-2003) Takeshi Azuma, University of Fukui Faculty of Medical Sciences, General Medicine Second Department of Internal Medicine; Shimoaizuki 23-3, Matsuoka-cho, Yoshida-gun, Fukui 910-1193, Japan (E-mail:azuma@fmsrsa.fukui-med.ac.jp, Tel:8.
-Azuma,T., Yamakawa,A., Yamazaki,S., Ohtani,M., Ito,Y., Muramatsu,A., Suto,H., Yamazaki,Y., Keida,Y., Higashi,H. and Hatakeyama,M., "Distinct diversity of the cag pathogenicity island among Helicobacter pylori strains in Japan", J. Clin. Microbiol. 42 (6), 2508-2517 (2004) PUBMED 15184428.
| DNA sequence : | |
ATGTTTAGAAAACTAGCAACCGCTGTATCGCTCATAGGCTTACTAACCTCTAACACTCTTTATACTAAAGAAATAAGTGA
AGCCGATAAGGTCATTAAGGCCACTAAAGAAACTAAAGAGACCAAGAAAGAAGCTAAACGACTCAAAAAAGAAGCCAGAC
AGCGCCAACAGATCCCTGATCATAAGAAACCTCAATATGTTTCTGTTGATGACACAAAAACTCAAGCGCTTTTTGATATA
TACGACACCTTGAATGTGAATGACAAAAGCTTTGGTGATTGGTTTGGTAATAGCGCTTTGAAAGACAAAACCTATCTCTA
CGCTATGGATCTATTGGATTACAACAACTATCTATCCATAGAAAACCCCATTATCAAAACAAGAGCAATGGGAACCTATG
CGGATCTCATCATCATCACAGGCTCACTAGAACAAGTCAATGGGTATTACAACATTCTAAAAGCGCTCAACAAACGCAAC
GCTAAGTTTGTCTTAAAAATCAATGAAAACCTGCCTTACGCCCAAGCGACTTTTTTGAGAGTGCCAAAAAGAAGCGATCC
CAATGCCCATACGCTTGATAAGGGAGCGTCAATTGATGAGAATAAGCTTTTTGAACAACAAAAACGCGCGTATTTCAACT
ACGCCAACGATGTGATCTGCAGACCCAATGATGAAGTGTGTTCGCCCCTAAGAGATGAAATGGTAGCTATGCCCACTAGC
GATAGCACTACTCAAAAACCTAATATCATTGCTCCTTATAGCTTGTATAGACTAAAAGAGACAAATAACGCCAATGAGGC
TCAACCATCACCTTATGCCACTCAAACCGCTCCTGAAAACAGCAAAGAGAAGCTCATAGAAGAGCTAATCGCTAACTCCC
AACTCATAGCCAATGAAGAAGAGAGGGAAAAGAAACTCTTAGCAGAAAAAGAAAAACAAGAGGCTGAATTGGCTAAATAC
AAGCTCAAAGACTTAGAAAATCAAAAGAAACTAAAAGCTTTAGAAGCAGAGTTGAAAAAGAAAAATGCTAATAAACCTAG
AGTAGTGGAAGTGCCTATTTCTCCTAGAACAAGTGATCCTGATGAAACAATGAGAGTTGTCAAGGAAAAAGAAAATTATA
ATGGATTGTTAGTGGATAAAGAAACCACGATCAAACGAAGCTATCAAGGGACTTTGATTAGTGAAAATTCTTACAGCAAA
AAAACACCTCTCAACCCTAATGACTTAAGAAGCTTAGAAGAAGAAATTAAGAGCTACTATATTAAGTCTAATGGCTTGTG
TTATGTTAATGGCATCAGTCTCTATGTCAAAATCAAAAACGACCCCTATAAAGAGGGAATGCTGTGTGGCTATGAGAGTA
TTCAAAATCTGCTCTCACCTCTAAAGGACAAGCTCAAGTACGACAAGCAAAAGTTACAAAAAGCGTTACTGAAAGATTCA
AAGTAA
|
| Protein sequence : | |
MFRKLATAVSLIGLLTSNTLYTKEISEADKVIKATKETKETKKEAKRLKKEARQRQQIPDHKKPQYVSVDDTKTQALFDI
YDTLNVNDKSFGDWFGNSALKDKTYLYAMDLLDYNNYLSIENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRN
AKFVLKINENLPYAQATFLRVPKRSDPNAHTLDKGASIDENKLFEQQKRAYFNYANDVICRPNDEVCSPLRDEMVAMPTS
DSTTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEEEREKKLLAEKEKQEAELAKY
KLKDLENQKKLKALEAELKKKNANKPRVVEVPISPRTSDPDETMRVVKEKENYNGLLVDKETTIKRSYQGTLISENSYSK
KTPLNPNDLRSLEEEIKSYYIKSNGLCYVNGISLYVKIKNDPYKEGMLCGYESIQNLLSPLKDKLKYDKQKLQKALLKDS
K
|
|
