PAI Gene Information


Name : tnpB
Accession : BAC53828.1
PAI name : SRImec-III and SCCmec-III region
PAI accession : AB038513
Strain : Staphylococcus aureus 04-02981
Virulence or Resistance: Not determined
Product : transposase B(Tn554)
Function : -
Note : ORF No.CZ117
Homologs in the searched genomes :   77 hits    ( 75 protein-level,   2 DNA-level )  
Publication :
    -Ito,T., Hiramatsu,K. and Katayama,Y., "Complete structure of three types of staphylococcal cassette chromosome mec(SCCmec) integrated in the genome of MRSA strains in the world", Unpublished.

    -Ito,T., Hiramatsu,K. and Oonuki,Y., "Direct Submission", Submitted (18-FEB-2000) Contact:Teruyo Ito Juntendo University, Faculty of Medicine, Department of Bacteriology; 2-1-1 Hongo, Bunkyo-ku, Tokyo 113-8421, Japan.


DNA sequence :
ATGAATGCTTCTAGTAAAAGGAAAATTATTAGTCAGAGTGAGATTAGCAAAAAAATAGCTGTAATGAATGAAGAAATGCA
GGGGTTTTGGGCTAATAATAGTTGGGATATAAGAAAATGTCCACATCCTTCTGCCATAGAATTAAGTAAGAATCCTGCTT
TAAGGAATCGTTGGGTTCGTTTTGAACGTGTTAAAAATCTGTGGTTAAGAACAGAATTGAAATATTTTTATTTTTACCAT
TTAAACAATGGAATATGGAATGCAAAAACTGTCTGGATTAGAAAAGGAACAGTAATTAATAAAATGTTAGATTTCTTAGA
TTTAAAGTATCCTAGCATTACTTCAATTACTGAAGTTCCTATTGAAAAAGCAATGACGGAGTATAGAACTTATTTGACAA
AACGGGGTGTTAGAATTACCACTACTAATTATAAGATTACTGCTAATCAAGAAAAAACACCTGTAAAAGCTAATTCCTAC
TATGTTACTAATCTAAAACAATTTATGGAGTTTTATGAGAACTTTTATTTTGATGGAGAGGAGTGGGATAAAGACGTTTG
GGATAGACGTAACTTACCTTTGCCAGATGATAAGGTTAACCCAACACAATATGAATATACAATTAACTTTAAAGGGTTTC
GGAATACATATTTTAAACAACTTGTAAAAAGATATTGTAAGTTGAGATTGAACGTGGATAGCTTTTCCTATGTAAGTGAT
ATTGCCCAAAGACTTAAAGAGTTCTTTAATTTTCTGGACATGAAATTTAAACAAGTTCAGAGAGTACACCAATTAACGAG
AGTGGAAATTGAAGCATATTTAAGTGAACTAAACATGATGGGAATAAAACCTAGTACAATAACTGGGAGGATCTCTATAT
TGGAAGGACTATTTAGTACCCTTCTTAGGCTAGAATGGGATGATGTTCCTTCCAAAATATTAATTTATTCTGAGGACTAT
CCGAAAATACCAAGAGCAAAACCACGCTTTATAGATGAATTCGTCCTAGAGCAATTGAACAGTCATCTTGATAAATTACC
CGAATATATAGCTACGATGACTATGATTGTTCAAGAATGTGGAATGAGGATAAGTGAATTGTGCACCTTGAAAAAAGGCT
GTCTATTAGAGGACAAAGATGGAGATTTCTTTTTAAAGTATTATCAATGGAAAATGAAAAAGGAGCATATAGTTCCAATA
TCTAAAGAGGTAGCTTTACTTATTAAAGTTCGGGAAGATAAAGTTTCAGAGGAATTTCCAGATAGTGAATACCTCTTTCC
AAGAAAAGATGGATCGCCATTAAAACAAGAAACATTTAGAGGTGAGTTAAATAAATTAGCTTATGAGCAAAATATAGTGG
ATAAATCAGGTGAGATTTATAGATTCCATGCCCATGCCTTTCGCCATACAGTAGGAACAAGAATGATTAACAACGGGATG
CCCCAGCATATTGTGCAGAAATTTTTGGGGCATGAAAGCCCAGAAATGACAAGCAGATACGCTCATATCTTTGATGAAAC
TCTAAAAAATGAATTTACTAAATTTCAGGAAAAACTGGTTACCAATAATGGAGATGTGCTTGATCTAGATGAAGATAATG
AAGTCGATGATGTAGAGCTTCAATGGTTCAAGAAAAATATAAATGCACAAGTGCTTCCAAATGGTTATTGTAGATTGCCA
GTAGTAGCAGGTGGTTGTCCACATGCGAATGCATGCTTAGATTGCACTCACTTCTGTACCAGTAAGCAATTCTTACCACA
GCACGAAGAACAGTTAGAGCGTACAGAAGAGTTATTAGCCATAGCTAAGGATAAACAATGGCAAAGACAAGTAGAGACTA
ATAGCCGTGTTAAAGAGCGTTTAGAACAAATCATTGGAAGTTTGACGGGGTAA

Protein sequence :
MNASSKRKIISQSEISKKIAVMNEEMQGFWANNSWDIRKCPHPSAIELSKNPALRNRWVRFERVKNLWLRTELKYFYFYH
LNNGIWNAKTVWIRKGTVINKMLDFLDLKYPSITSITEVPIEKAMTEYRTYLTKRGVRITTTNYKITANQEKTPVKANSY
YVTNLKQFMEFYENFYFDGEEWDKDVWDRRNLPLPDDKVNPTQYEYTINFKGFRNTYFKQLVKRYCKLRLNVDSFSYVSD
IAQRLKEFFNFLDMKFKQVQRVHQLTRVEIEAYLSELNMMGIKPSTITGRISILEGLFSTLLRLEWDDVPSKILIYSEDY
PKIPRAKPRFIDEFVLEQLNSHLDKLPEYIATMTMIVQECGMRISELCTLKKGCLLEDKDGDFFLKYYQWKMKKEHIVPI
SKEVALLIKVREDKVSEEFPDSEYLFPRKDGSPLKQETFRGELNKLAYEQNIVDKSGEIYRFHAHAFRHTVGTRMINNGM
PQHIVQKFLGHESPEMTSRYAHIFDETLKNEFTKFQEKLVTNNGDVLDLDEDNEVDDVELQWFKKNINAQVLPNGYCRLP
VVAGGCPHANACLDCTHFCTSKQFLPQHEEQLERTEELLAIAKDKQWQRQVETNSRVKERLEQIIGSLTG