Name : tnp
Accession : BAB72117.1
PAI name : Type-IVa SCCmec
PAI accession : AB063172
Strain : Staphylococcus aureus 04-02981
Virulence or Resistance: Not determined
Product : transposase of IS431mec
Function : -
Note : ORF No.Q012; putative
Homologs in the searched genomes : 594 hits ( 588 protein-level, 6 DNA-level )
Publication :
-Hiramatsu,K., Cui,L., Kuroda,M. and Ito,T., "The emergence and evolution of methicillin-resistant Staphylococcus aureus", Trends Microbiol. 9 (10), 486-493 (2001) PUBMED 11597450.
-Ito,T., Okuma,K., Ma,X.X., Yuzawa,H. and Hiramatsu,K., "Insights on antibiotic resistance of Staphylococcus aureus from its whole genome: genomic island SCC", Drug Resist. Updat. 6 (1), 41-52 (2003) PUBMED 12654286.
-Ma,X.X., Ito,T., Tiensasitorn,C., Jamklang,M., Chongtrakool,P., Boyle-Vavra,S., Daum,R.S. and Hiramatsu,K., "Novel type of staphylococcal cassette chromosome mec identified in community-acquired methicillin-resistant Staphylococcus aureus strains", Antimicrob. Agents Chemother. 46 (4), 1147-1152 (2002) PUBMED 11897611.
-Xue,M.X., Ito,T., Hiramatsu,K. and Tiensasitorn,C., "Direct Submission", Submitted (12-JUN-2001) Contact:Teruyo Ito Juntendo University, Department of Bacteriology; Hongo 2-1-1, Bunkyo-ku, Tokyo 113-8421, Japan.
| DNA sequence : | |
ATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATACATTGAG
TTATCGTGATATATCTGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAAT
ATGCCCCAATTTTGTATCAAATTTGGAAGAAAAAGCATAAAAAAGCTTATTACAAATGGCGTATTGATGAGACGTACATC
AAAATAAAAGGAAAATGGAGCTATTTATATCGTGCCATTGATGCAGAGGGACATACATTAGATATTTGGTTGCGTAAGCA
ACGAGATAATCATTCAGCATATGCGTTTATCAAACGTCTCATTAAACAATTTGGTAAACCTCAAAAGGTAATTACAGATC
AGGCACCTTCAACGAAGGTAGCAATGGCTAAAGTAATTAAAGCTTTTAAACTTAAACCTGACTGTCATTGTACATCGAAA
TATCTGAATAACCTCATTGAGCAAGATCACCGTCATATTAAAGTAAGAAAGACAAGGTATCAAAGTATCAATACAGCAAA
GAATACTTTAAAAGGTATTGAATGTATTTACGCTCTATATAAAAAGAACCGCAGGTCTCTTCAGATCTACGGATTTTCGC
CATGCCACGAAATTAGCATCATGCTAGCAAGTTAA
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| Protein sequence : | |
MNYFRYKQFNKDVITVAVGYYLRYTLSYRDISEILRERGVNVHHSTVYRWVQEYAPILYQIWKKKHKKAYYKWRIDETYI
KIKGKWSYLYRAIDAEGHTLDIWLRKQRDNHSAYAFIKRLIKQFGKPQKVITDQAPSTKVAMAKVIKAFKLKPDCHCTSK
YLNNLIEQDHRHIKVRKTRYQSINTAKNTLKGIECIYALYKKNRRSLQIYGFSPCHEISIMLAS
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