Name : unnamed
Accession : BAB72106.1
PAI name : Type-IVa SCCmec
PAI accession : AB063172
Strain : Staphylococcus aureus 04-02981
Virulence or Resistance: Not determined
Product : hypothetical protein
Function : -
Note : ORF No.Q003
Homologs in the searched genomes : 37 hits ( 37 protein-level )
Publication :
-Hiramatsu,K., Cui,L., Kuroda,M. and Ito,T., "The emergence and evolution of methicillin-resistant Staphylococcus aureus", Trends Microbiol. 9 (10), 486-493 (2001) PUBMED 11597450.
-Ito,T., Okuma,K., Ma,X.X., Yuzawa,H. and Hiramatsu,K., "Insights on antibiotic resistance of Staphylococcus aureus from its whole genome: genomic island SCC", Drug Resist. Updat. 6 (1), 41-52 (2003) PUBMED 12654286.
-Ma,X.X., Ito,T., Tiensasitorn,C., Jamklang,M., Chongtrakool,P., Boyle-Vavra,S., Daum,R.S. and Hiramatsu,K., "Novel type of staphylococcal cassette chromosome mec identified in community-acquired methicillin-resistant Staphylococcus aureus strains", Antimicrob. Agents Chemother. 46 (4), 1147-1152 (2002) PUBMED 11897611.
-Xue,M.X., Ito,T., Hiramatsu,K. and Tiensasitorn,C., "Direct Submission", Submitted (12-JUN-2001) Contact:Teruyo Ito Juntendo University, Department of Bacteriology; Hongo 2-1-1, Bunkyo-ku, Tokyo 113-8421, Japan.
| DNA sequence : | |
ATGAGTTACACATTGTTTGAAATTGGCCCATTTGCTTTAGATTCCTTCGGTTGGAAAGAAACGATACCACCTAAAAAAGA
TGGTGACAGTGAAAAAGTGGTTAGAATGGCTAGCCCTATTATTGTTAATGCAAGATTTTCTGATCCAATTACTGGTGTTG
AAAAGTTGATTATTACTAACAACAATGGTAAAAAAGACATTTTTGAGTCTGATATCTTAACAACACGAAACTTACCTTCT
TTAATTAAATATGGCTACAGTATTAACGAGAAGTATATTAGATCATTGAGTTATGCCTTGCAATTGATGCGAGATAGATT
ACCACTTTCTGAATTATATGAGGGTGTAGGTATACTAGAGACACCTTTTGGCTACTTGATATCGCTAGATAAAGTTCTCA
AATCTATTCAATTTAATCAGTCCTCACCTTCATACCCTATTGTAGATAGTGCTTATGACTTAACTCCTAAAGGTACATTT
GATAATTGGTTTAACATGTATATTGACGAGGTTAAAGGTCATCTTCTTTTAGAATTGGCAGTCATATTTGGGATTTCTGC
CTTAGTGACAAGTTTTCTGAAGCATAAACATGAAATCGAATTTGCAGGAATTCTCTTTAGTTTTACAGGTCAATCCTCAA
CCGGTAAGTCAACCGCAGCTGCTTTAGCTGTATCAGTCGCTGGTAACCCTACCAAAGGTAATGAAACTCTTTTTAGAAGT
TGGAATGCCACACGAAACGCACTTGAAGGTTATTTGAGTAACAATTATGGCATTCCTATAGTATTTGATGAGCTTTCATC
TACGACACTTAGAGATACCACGGGTTTGTTATATTCCATCGCTGAAGGTCAAGGTCGTCAACGTTCAAACGTTCATGGAG
AAGTTAAAACGCCTAAGAATTGGGGTACTTCTGTCATTTCAACGTCAGAATACAGTATTTTTAATGATTCAGCTCAAAAC
GATGGATTACGTGTAAGAACCATCGAGATTAATGAACAATTCACTACAAATGCGACCAATGCTGACAATATTAAAAAAGC
TGTAGCACTAAACTATGGTCATGTTTTACCGTTAGTAGCTAAATATCTTATAAATCGTGAAGATGAAGTTATTCAATGGT
TTTACAAGGAAGTAGATTGGTTTGAAGCTAAATTGAAAGATGAAACAAACAATACAGGTATTCGTATGTTTAAGCGTTAT
GCAGTCATTACAACATCTGCGAAAATATTAGGTCGTGTTTTATCTACAGATATTGATATCGCTAATATAAGAGACTACTT
TATTGATTATCATACTCATACAGTCTCTGAACGCTCATTAGCTGATAAAGCTATTGATGTCATCATTCAATTTGTGGCAC
AAAACAGAGGTAAGTTTTCAGATGAAGGTGCTTTGAAAAATATGTTTGAGAACTATGGATTAATCTCATTAAAAGATGAC
CATATCGAAGTAAAAATGATTGCGAACGTTTTTAAACAGATGCTAAACAATCATCAATTTCAAGATGTTAATAATGTTGT
CAACGCCTTAAGAGATAAAGGTTTCATATTAGCTGACCGTGGACGCCAAACAACTAAAAGAAGTGTCAAAGATAATAGCG
GTAAAAAACAATCACTTGTATTTTACCATCTAAAATTAGATGTAGAGTTTGCATCTATCCTGGGATTAACTAAAGATAAG
TCGTTAATTCAAAATTGGACACCGGCAAATGATAACAAAGCTGCGAAAGAACTTTTTAAATCCGCTAATGAGGGGATAGG
CCCTTCAGGAGTTCACGAAGATTTCTGA
|
| Protein sequence : | |
MSYTLFEIGPFALDSFGWKETIPPKKDGDSEKVVRMASPIIVNARFSDPITGVEKLIITNNNGKKDIFESDILTTRNLPS
LIKYGYSINEKYIRSLSYALQLMRDRLPLSELYEGVGILETPFGYLISLDKVLKSIQFNQSSPSYPIVDSAYDLTPKGTF
DNWFNMYIDEVKGHLLLELAVIFGISALVTSFLKHKHEIEFAGILFSFTGQSSTGKSTAAALAVSVAGNPTKGNETLFRS
WNATRNALEGYLSNNYGIPIVFDELSSTTLRDTTGLLYSIAEGQGRQRSNVHGEVKTPKNWGTSVISTSEYSIFNDSAQN
DGLRVRTIEINEQFTTNATNADNIKKAVALNYGHVLPLVAKYLINREDEVIQWFYKEVDWFEAKLKDETNNTGIRMFKRY
AVITTSAKILGRVLSTDIDIANIRDYFIDYHTHTVSERSLADKAIDVIIQFVAQNRGKFSDEGALKNMFENYGLISLKDD
HIEVKMIANVFKQMLNNHQFQDVNNVVNALRDKGFILADRGRQTTKRSVKDNSGKKQSLVFYHLKLDVEFASILGLTKDK
SLIQNWTPANDNKAAKELFKSANEGIGPSGVHEDF
|
|
