Name : cagE
Accession : AGC69804.1
PAI name : cag PAI
PAI accession : JQ685152
Strain : Helicobacter pylori 2017
Virulence or Resistance: Virulence
Product : cag pathogenicity island protein E
Function : -
Note : -
Homologs in the searched genomes : 43 hits ( 43 protein-level )
Publication :
-Barrozo,R.M., Cooke,C.L., Hansen,L.M., Lam,A.M., Gaddy,J.A., Johnson,E.M., Cariaga,T.A., Suarez,G., Peek,R.M. Jr., Cover,T.L. and Solnick,J.V., "Functional Plasticity in the Type IV Secretion System of Helicobacter pylori", PLoS Pathog. 9 (2), E1003189 (2013) PUBMED 23468628.
-Hansen,L.M., "Direct Submission", Submitted (17-FEB-2012) Center for Comparative Medicine, University of California, Davis, County Road 98 & Hutchison Drive, Davis, CA 95616, USA.
| DNA sequence : | |
GTGTTTGTGGCAAGCAAACAAGCTGACGAACAAAAAAAGCTAGTCATAGAGCAAGAGGTTCAAAAGCGCCAATTTCAAAA
AATAGAAGAACTTAAAGCAGACATGCAAAAGGGTGTCAATCCCTTTTTTAAAGTCTTGTTTGATGGGGGGAATAGGTTGT
TTGGTTTCCCTGAAACTTTTATTTATTCCTCTATATTTATATTGTTTGTAACAATTGTATTATCTGTTATTCTTTTTCAA
GCCTATGAACCTGTTTTGATTGTAGCGATTGTTATTGTGCTTGTAGCTCTTGGATTCAAGAAAGATTACAGGCTTTATCA
AAGAATGGAGCGAGCGATGAAATTTAAAAAACCTTTTTTGTTTAAGGGCGTGAAAAACAAAGCGTTCATGAGCATTTTTT
CCATGAAGCCTAGTAAAGAAATGGCTAATGACATCCACTTAAATCCAAACAGAGAAGACAGACTTGTGAGCGCTGCAAAC
TCCTATCTAGCGAATAACTATGAATGTTTTTTAGATGATGGGGTGATCCTTACTAACAACTATTCTCTTTTAGGCACAAT
CAAATTGGGGGGCATTGATTTTTTAACCACTTCAAAAAAAGATCTCATAGAGTTACACGCTTCTATTTATAGCGTTTTTA
GGAATTTTGTTACCCCTGAATTCAAATTTTATTTTCACACTATTAAAAAGAAAATCGTTATTGATGAAACCAATAGGGAC
TATGGTCTTATTTTTTCTAATGATTTTATGCGAGCCTATAATGAGAAGCAAAAGAGAGAAAGTTTTTATGATATTAGTTT
TTATCTCACCATAGAGCAAGATTTATTAGACACTCTCAATGAACCCGTTATGAATAAAAAGCATTTTGCAGACAATAATT
TTGAAGAGTTTCAAAGGATTATTAGAGCCAAGCTTGAAAACTTCAAGGATAGGATAGAGCTCATAGAAGAGCTATTGAGT
AAATACCACCCCATTAGATTAAAAGAATACACTAAAGATGGCGTTATTTACTCCAAACAATGCGAGTTTTATAATTTCCT
TGTGGGAATGAATGAAGCCCCTTTTATTTGCAACAGAAAAGACTTGTATCTCAAGGAAAAAATGCATGGTGGGGTGAAAG
AAGTTTATTTTGCCAATAAGCATGGAAAAATCTTAAATGACGATTTGAGTGAAAAATATTTTAGCGCTATTGAGATTAGT
GAATACGCCCCTAAATCACAGAGCGATTTGTTTGATAAAATCAACGCTCTAGACAGCGAATTTATCTTTATGCATGCTTA
TTCGCCTAAAAACTCACAGGTTTTAAAGGACAAACTAGCTTTCACTTCTAGAAGAATTATTATTAGTGGAGGCTCTAAAG
AGCAGGGCATGACTTTAGGTTGCTTGAGCGAATTAGTGGGTAATGGCGATATTACGCTAGGCAGTTATGGTAATTCTTTA
GTGTTGTTTGCTGATAGCTTTGAAAAAATGAAACAAAGCGTTAAGGAATGTGTCTCTAGTCTTAACGCTAAAGGTTTTTT
AGCCAACGCGGCGACTTTCTCTATGGAAAATTACTTTTTTGCCAAACATTGCTCTTTTATCACGCTTCCTTTTATTTTTG
ATGTAACTTCTAATAATTTTGCTGATTTTATTGCGATGAGGGCTATGAGCTTTGATGGCAATCAGGAGAATAACGCTTGG
GGCAATAGCGTCATGACACTAAAAAGCGAGATCAATTCGCCTTTTTATCTGAACTTCCACATGCCCACTGATTTTGGTTC
AGCTTCAGCAGGACACACTTTGATACTTGGATCAACCGGTTCAGGTAAGACAGTGTTTATGTCAATGACCTTGAACGCTA
TGGGGCAATTTGTTCACAATTTTCCTGCTAATGTCAGCAAAGACAAGCAAAAGCTCACTATGGTCTATATGGATAAAGAT
TATGGCGCTTATGGGAATATTGTCGCAATGGGTGGGGAGTATGTCAAAATTGAGCTAGGGACAGATACAGGATTAAATCC
TTTTGCTTGGGCAGCTTGTGTGCAAAAAACAAATGCAACAATGGAGCAAAAACAAACGGCTATTTCTGTTGTCAAAGAGC
TTGTGAAAAACTTAGCAACCAAAAGCGATGAAAAAGATGAAAATGGCAACAGCATCTCTTTTAGCCTAGCAGATTCTAAT
ACGCTTGCAGCGGCAGTAACCAACCTTATCACAGGAGATATGAACCTAGATTATCCCATCACTCAACTTATTAATGCTTT
CGGGAAAGACCACAATGATCCTAATGGGCTTGTCGCGCGATTAGCACCTTTTTGCAAATCAACCAATGGTGAATTTCAAT
GGCTTTTTGATAATAAAGCAACGGATCGCTTAGATTTTTCAAAAACGATTATTGGCGTTGATGGGTCAAGTTTCTTAGAC
AATAATGATGTTTCGCCCTTTATTTGTTTTTACCTTTTCGCTCGTATCCAAGAGGCAATGGATGGGCGTAGATTTGTCTT
AGATATTGATGAAGCTTGGAAATATTTAGGCGATCCAAAGGTCGCTTATTTTGTGAGAGACATGCTAAAAACTGCAAGGA
AAAGAAACGCTATTGTCAGACTTGCGACTCAAAGCATCACTGATCTTTTGGCTTGCCCTATTGCTGATACGATTAGAGAA
CAATGCCCTACAAAGATTTTTTTGAGAAACGATGGGGGCAATCTTTCTGATTACCAAAGATTAGCTAATGTTACAGAAAA
AGAATTTGAAATCATCACTAAGGGACTAGACAGGAAAATTCTCTACAAACAAGATGGAAGCCCTAGCGTTATCGCTAGTT
TTAATTTGAGAGGCATTCCTAAAGAATATTTGAAAATTTTATCCACAGATACTGTATTTGTCAAAGAAATTGACAAGATT
ATCCAAAACCATAGTATCATAGATAAATATCAGGCCTTGAGGCAAATGTATCAACAAATAGAGGAGTATTAA
|
| Protein sequence : | |
MFVASKQADEQKKLVIEQEVQKRQFQKIEELKADMQKGVNPFFKVLFDGGNRLFGFPETFIYSSIFILFVTIVLSVILFQ
AYEPVLIVAIVIVLVALGFKKDYRLYQRMERAMKFKKPFLFKGVKNKAFMSIFSMKPSKEMANDIHLNPNREDRLVSAAN
SYLANNYECFLDDGVILTNNYSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYFHTIKKKIVIDETNRD
YGLIFSNDFMRAYNEKQKRESFYDISFYLTIEQDLLDTLNEPVMNKKHFADNNFEEFQRIIRAKLENFKDRIELIEELLS
KYHPIRLKEYTKDGVIYSKQCEFYNFLVGMNEAPFICNRKDLYLKEKMHGGVKEVYFANKHGKILNDDLSEKYFSAIEIS
EYAPKSQSDLFDKINALDSEFIFMHAYSPKNSQVLKDKLAFTSRRIIISGGSKEQGMTLGCLSELVGNGDITLGSYGNSL
VLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFIFDVTSNNFADFIAMRAMSFDGNQENNAW
GNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTGSGKTVFMSMTLNAMGQFVHNFPANVSKDKQKLTMVYMDKD
YGAYGNIVAMGGEYVKIELGTDTGLNPFAWAACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSN
TLAAAVTNLITGDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKATDRLDFSKTIIGVDGSSFLD
NNDVSPFICFYLFARIQEAMDGRRFVLDIDEAWKYLGDPKVAYFVRDMLKTARKRNAIVRLATQSITDLLACPIADTIRE
QCPTKIFLRNDGGNLSDYQRLANVTEKEFEIITKGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVKEIDKI
IQNHSIIDKYQALRQMYQQIEEY
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