Name : cagW
Accession : AGC69796.1
PAI name : cag PAI
PAI accession : JQ685144
Strain : Helicobacter pylori 2017
Virulence or Resistance: Virulence
Product : cag pathogenicity island protein W
Function : -
Note : -
Homologs in the searched genomes : 46 hits ( 45 protein-level, 1 DNA-level )
Publication :
-Barrozo,R.M., Cooke,C.L., Hansen,L.M., Lam,A.M., Gaddy,J.A., Johnson,E.M., Cariaga,T.A., Suarez,G., Peek,R.M. Jr., Cover,T.L. and Solnick,J.V., "Functional Plasticity in the Type IV Secretion System of Helicobacter pylori", PLoS Pathog. 9 (2), E1003189 (2013) PUBMED 23468628.
-Hansen,L.M., "Direct Submission", Submitted (17-FEB-2012) Center for Comparative Medicine, University of California, Davis, County Road 98 & Hutchison Drive, Davis, CA 95616, USA.
| DNA sequence : | |
ATGAAAAGGACTTTTTTAATAACGATCATAAGTTTTTTTCTCATTGTTCCTAATTGGTTGAAAGCTATTGATTTGCCCAT
TGTTTCCAATCTCAAAATTTACCAAACAGTTTATTGCATGCTGATACCGAGTTATGTTTTAACCAACAAAAGTTTTGCAG
ATATTTTGACAGGCTATACATCTATTGGTGCATCAGGGAGTGGAAAGAGTTCAGGGCAGGGTGTGATCGAAGCGCTTAGC
ACACCATTAGCCACAAGTTTAGCCGCTAGCAATCTGGTGAAATATTTGAATACTTTAGGTCCTTTATGGGGATCGGCATG
GGCAAGTGTTGCTACAGCTATACAAGGTTTTGCTCTAACGCCATCAAGTGGCTGTAATTTTGGTTGGAACGCATTGATAA
ATAAAAACATAGATGTATCCATGGATAGCGTGCTAGACAATTTGAGCAACAAGATTCAGAATTTTACCAAAGGCGGTGTT
GAGAACAATGTGAAAGGCAATATTCTTTTACAAATAATTGGCTCAATAACCGCTCAAGCTTCTACGAATATTACAGCCGA
TGGTTTAATTTGGCTGATTGGTAAAGAATTCACTGCAAATAAACTGCAAAACAACACTACAGCCATGCTTGCTTTTGTCG
CATTAGAATCTGTTGTCAAAGGAGCGGACGCTGCTGTTCTTCCTGCATATGGTGTAGTCAATCTGCCTGATATTATCATA
GGGCAAGGGTCATATCTTGATTTTGTTTCTTACCTAATTTATATTGTTTTTGGGATTTTTGTTTTCATTTCTTTTATGAA
ATTGAGGGATATTTCAAATGGTATTCAGATTAACATAGGTTTTGAATACATGCGATTTGTTGGGGGGACATTATTCAAAA
TGGCGATGGTCTCTTTTATCGCCTATGCAGGTTTTGGTTATCTTTATAAAATCTCTTATTCTATTTATTTTGGTTTAGCA
GGCGCTTTTGGGCTAAATCAAGTTCTTTTTTGGGCTTTAGATTTAGTGCTGAATTACACTGTTAATTCAATTTTACCTGC
AGTAAGAGCTGTTTTTTCTAATGTTGGCAACAACGCTCCTAGTTTGTTACAAGGCTTGCAAGTGGCAGGTATTTCTTTGT
TTGCTATTTTTATGCAAGTAACTATCATTATGAGAATAAGCACTGTTGTTGTGAAACCTTTGATAGCGGGGGCTTTTAGC
GGTATTGTGTTCCCTATTGCAGTATGTTTGATCGTTCTAGATTGGTTCAAAGATTCTATGAAAAACATATTGATATGGTT
TATTAATAATTTGTTTATCTTGGTTCTAGCTATTCCTATTTTGCTCTTTGGTGTTTTGGCATTATTGGCATTCAATTTGA
CCATAACGCCCTCTGTTGCTATACAAAACATCAATCAAGGGGGACTAGGTATCGATTCAACTATTGCGAGTTTGATCACC
CTATTTATTTTAAAAGGTTTCATAGAGACGATTATTGAGAGTGTCAATGCGATCGTTAATACCATTTTCAGCTCTGTTTC
TATGGATGGTAGCAGAATGGATAGAGAAAGAGATGCCTTAATGGTTGGAAGAGTTGGTGGATCTATGTTTAAAGGATAA
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| Protein sequence : | |
MKRTFLITIISFFLIVPNWLKAIDLPIVSNLKIYQTVYCMLIPSYVLTNKSFADILTGYTSIGASGSGKSSGQGVIEALS
TPLATSLAASNLVKYLNTLGPLWGSAWASVATAIQGFALTPSSGCNFGWNALINKNIDVSMDSVLDNLSNKIQNFTKGGV
ENNVKGNILLQIIGSITAQASTNITADGLIWLIGKEFTANKLQNNTTAMLAFVALESVVKGADAAVLPAYGVVNLPDIII
GQGSYLDFVSYLIYIVFGIFVFISFMKLRDISNGIQINIGFEYMRFVGGTLFKMAMVSFIAYAGFGYLYKISYSIYFGLA
GAFGLNQVLFWALDLVLNYTVNSILPAVRAVFSNVGNNAPSLLQGLQVAGISLFAIFMQVTIIMRISTVVVKPLIAGAFS
GIVFPIAVCLIVLDWFKDSMKNILIWFINNLFILVLAIPILLFGVLALLAFNLTITPSVAIQNINQGGLGIDSTIASLIT
LFILKGFIETIIESVNAIVNTIFSSVSMDGSRMDRERDALMVGRVGGSMFKG
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