Name : cagY
Accession : AGC69788.1
PAI name : cag PAI
PAI accession : JQ685136
Strain : Helicobacter pylori 2017
Virulence or Resistance: Virulence
Product : cag pathogenicity island protein Y
Function : -
Note : -
Homologs in the searched genomes : 15 hits ( 14 protein-level, 1 DNA-level )
Publication :
-Barrozo,R.M., Cooke,C.L., Hansen,L.M., Lam,A.M., Gaddy,J.A., Johnson,E.M., Cariaga,T.A., Suarez,G., Peek,R.M. Jr., Cover,T.L. and Solnick,J.V., "Functional Plasticity in the Type IV Secretion System of Helicobacter pylori", PLoS Pathog. 9 (2), E1003189 (2013) PUBMED 23468628.
-Hansen,L.M., "Direct Submission", Submitted (17-FEB-2012) Center for Comparative Medicine, University of California, Davis, County Road 98 & Hutchison Drive, Davis, CA 95616, USA.
| DNA sequence : | |
ATGAATGAAGAAAACGATAAACTTGAAACTTCTAAAAAAACCCAACAACATTCACCCCAAGATTTATCCAATGAAGAAGC
AACAGAGATCAATCACTTTGAAGATTCTTCAAAAGAATCCAAAGAAAGCTCAGATCATCATCTTAACAACCCTACAGAAA
CTAAAACCAATTTTGATGGAGACAAGTCAGAAGAAACCCAAACTCAAATGGATTCTGGTGGTGATGAAACTTCAGAATCT
AGCAATGGCAGTCTAGCAGACAAGTTATTCAAAAAAGCCAGAAAATTAGTTGATAATAAAAGACCTTTCACTCAGCAAAA
GAATTTAGATGAAGAAACCCAAGAACTGAACGAAGAAGACGATCAAGAAAATAATGGGTATCAAGAAGAAACTCAAACGG
GCTTAATTGATGATGAAACTTCTAAAAAAACCCAACAACATTCACCCCAAGATTTATCCAATGAAGAAGCAACAGAGATC
AATCACTTTGAAGATTCTTCAAAAGAATCCAAAGAAAGCTCAGATCCTTATCTTGATAACCCCACAGAAACTAAAACCAA
TTTTGATGGAGACAAGTCAGAAGAAACCCAAACTCAAATGGATTCTGGTGGTGATGAAACTTCAGAATCTAGCAATGGCA
GTCTAGCAGACAAGTTATTCAAAAAAGCCAGAAAATTAGTTGATAATAAAAGACCTTTCACTCAGCAAAAGAATTTAGAT
GAAGAAACCCAAGAACTGAACGAAGAAGACGATCAAGAAAATAATGGGTATCAAGAAGAAACTCAAACGGGCTTAATTGA
TGATGAAACTTCTAAAAAAACCCAACAACATTCACCCCAAGATTTATCCAATGAAGAAGCAACAGAGATCAATCACTTTG
AAGATTCTTCAAAAGAATCCAAAGAAAGCTCAGATCCTTATCTTGATAACCCCACAGAAACTAAAACCAATTTTGATGGA
GACAAGTCAGAAGAAACCCAAACTCAAATGGATTCTGGTGGTGATGAAACTTCAGAATCTAGCAATGGCAGTCTAGCAGA
CAAGTTATTCAAAAAAGCCAGAAAATTAGTTGATAATAAAAGACCTTTCACTCAGCAAAAGAATTTAGATGAAGAAACCC
AAGAACTGAACGAAGAAGACGATCAAGAAAATAATGGGTATCAAGAAGAAACTCAAACGGGCTTAATTGATGATGAAACT
TCTAAAAAAACCCAACAACATTCACCCCAAGATTTATCCAATGAAGAAGCAACAGAGATCAATCACTTTGAAGATTCTTC
AAAAGAATCCAAAGAAAGCTCAGATCCTTATCTTGATAACCCCACAGAAACTAAAACCAATTTTGATGAAGACAAGTCAG
AAGAAATAACTAACGACTCTAACGATCAAGAAATTATCAAAGGAAGCAAAAAGAAATATATTATTGGTGGCATTGTAGTC
GCTGTTCTTATCGTGATTATTTTATTTTCTAGAAGCATTTTTCACTACTTCATGCCTTTGGAAGATAAAAGCTCTCGTTT
TAGCAAAGACAGGAATCTTTATGTTAATGATGAAATCCAAATAAGGCAAGAGTATAACCGATTGCTGAAAGAACGGAATG
AAAAAGGCAATATGATCGATAAGAATCTTTTCTTCAATGACGATCCCAATAGAACCTTATACAACTATTTAAATATTGCA
GAAATTGAGGACAAAAACCCGTTGAGAGCCTTTTATGAATGTATTAGTAATGGTGGCAACTATGAAGAATGTTTGAAGCT
TATCAAAGACAAAAAACTTCAAGATCAGATGAAAAAGACTCTAGAGGCTTATAATGACTGCATCAAAAATGCCAAAACTG
AAGAAGAAAGGATCAAGTGTTTAGATTTAATCAAAGATGAAAACCTGAAAAAAAGCTTACTGAACCAACAAAAAGTTCAA
GTGGCGCTAGATTGTTTGAAAAACGCTAAAACTGATGAAGAACGGAAAGAGTGCCTAAAACTCATAAATGACCCTGAGAT
TAGAGAGAAATTCCGTAAGGAATTAGAGCTTCAAAAAGAGCTTCAAGAGTATAAGGATTGTATCAAAAACGCCAAAACAG
AAGCTGAGAAAAACGAATGCTTGAAAGGCTTGTCTAAAGAAGCTATAGAAAGATTGAAACAGCAAGCGCTAGATTGTTTG
AAAAACGCTAAAACTGATGAAGAACGAAACGAGTGCTTGAAAAATATTCCCCAAGACTTGCAAAAAGAACTACTAGCTGA
TATGAGCGTCAAGGCTTACAAGGATTGCGTATCAAAAGCTAGGAATGAAAAAGAGAAACAAGAATGCGAGAAATTACTCA
CGCCTGAAGCGAGGAAAAAGTTAGAACAACAGGTTCTAGATTGTTTGAAAAACGCTAAAACTGATGAAGAACGAAAAAAA
TGTTTGAAAGATCTCCCTAAAGACTTACAAAGCGATATTTTAGCTAAAGAGAGCGTTAAAGCTTATAAAGATTGCGTATC
TCAAGCCAAAAACGAAGCTGAGAAAAAAGAATGCGAGAAATTACTCACGCCTGAAGCGAAAAAACTTTTAGAAGAAGAAG
CCAAAGAGAGCGTTAAGGCTTATTTGGATTGCGTATCTCAAGCCAAAACTGAAGCCGAGAAAAAAGAGTGTGAGAAATTA
CTCACCCCTGAAGCGAGAAAAAAGTTAGAAGAAGCTAAAAAAAGCGTTAAAGCTTATTTGGACTGCGTATCTCAAGCCAA
AAACGAAGATGAGAAAAAAGAATGCGAGAAATTGCTCACCCCTGAAGCGAGAAAACTTTTAGAGCAACAAGCGTTAGATT
GTTTGAAAAATGCTAAAACCGATGAAGAACGAAAAAAGTGTTTGAAAGATCTCCCTAAAGACTTGCAGAAAAAGGTTTTA
GCCAAAGAGAGCGTTAAGGCTTATTTGGATTGCGTATCTCAAGCCAAAACTGAAGCCGAGAAAAAAGAATGCGAGAAATT
ACTCACGCCTGAAGCGAGAAAACTCTTAGAAGAGGCTAAAGAGAGCATTAAAGCTTATAAAGACTGCGTATCAAAAGCTA
GGAATGAAAAAGAGAAAAAAGAATGCGAGAAATTGCTCACCCCTGAAGCGAAAAAACTTTTAGAAGAAGAAGCCAAAGAG
AGCGTTAAAGCTTACTTAGATTGCGTATCTCAAGCCAAAACTGAAGCTGAGAAAAAAGAATGCGAGAAATTGCTCACCCC
TGAAGCGAAAAAAAAGTTAGAAGAAGCTAAAAAAAGCGTTAAAGCTTATTTGGATTGCGTATCTCAAGCCAAAAACGAAG
ATGAGAAAAAAGAATGCGAGAAATTGCTCACCCCTGAAGCGAAAAAACTTTTAGAACAACAAGCGCTAGATTGTTTGAAA
AACGCTAAAACCGAAGCTGATAAAAAAAGGTGTGTCAAAGATCTCCCTAAAGACCTGCAGAAAAAGGTTTTAGCTAAAGA
GAGCGTTAAAGCTTATAAAGACTGCGTATCAAGAGCTAGGAATGAAAAAGAGAAAAAAGAATGCGAGAAATTGCTCACCC
CTGAAGCGAAAAAACTTTTAGAAGAAGCTAAAAAAAGCGTTAAGGCTTATTTGGATTGCGTATCTCAAGCCAAAACCGAA
GCTGAGAAAAAAGAATGCGAAAAATTGCTCACCCCTGAAGCGAAAAAACTTTTAGAAGAAGCTAAAGAGAGTCTTAAAGC
TTATAAAGACTGCCTCTCTCAAGCTAGAAATGAAGAAGAAAGGAGAGCTTGCGAGAAACTACTCACGCCTGAAGCGAGGA
AACTCTTAGAGCAAGAAGTTAAGAAGAGCGTTAAGGCTTATTTGGATTGCGTATCTCAAGCCAAAACTGAAGCTGAGAAA
AAAGAATGCGAGAAATTACTCACCCCTGAAGCGAGAAAGTTCTTAGCGAAGCAAGTGCTAAATTGTTTGGAAAAAGCTGG
AAATGAAGAAGAAAGAAAAGCATGTCTTAAAAATCTCCCTAAAGACTTACAGGAAAATGTTTTAGCTAAAGAGAGTCTTA
AAGCTTATAAAGACTGCCTCTCTCAAGCTAGAAATGAAGAAGAAAGGAGAGCTTGCGAGAAATTGCTCACCCCTGAAGCG
AGAAAACTCTTAGAGCAAGAAGTTAAGAAGAGCGTTAAGGCTTATTTGGACTGCGTATCAAGAGCTAGGAATGAAAAAGA
GAAAAAAGAATGCGAGAAATTGCTCACCCCTGAAGCGAGGAAATTTTTAGCGAAAGAACTCCAACAAAAAGATAAAGCGA
TCAAAGATTGCTTGAAAAACGCCGATCCTAACGACAGAGCGGCTATCATGAAGTGTTTGGATGGTTTGAGCGATGAAGAG
AAGCTCAAATACCTGCAAGAAGCTAGAGAAAAGGCTGTCTTGGATTGTTTGAAAACGGCTAGGACCGATGAAGAAAAAAG
GAAATGCCAAAACCTTTATAGCGATTTGATCCAAGAAATCCAAAATAAAAGGACACAAAGCAAACAAAATCAATTGAGTA
AAACAGAAAGATTGCATCAAGCAAGCGAGTGCTTGGATAACTTAGATGACCCTACTGATCAACAAGCCATAGAGCAATGT
TTAGAGGGCTTGAGCGATAGTGAAAGGGCGCTAATTCTAGGAATTAAACGACAAGCTGATGAAGTGGATCGGATTTATAG
CGATCTAAGAAACCGCAAAACCTTTGATAACATGGCGGCTAAAGGTTATCCGTTGTTGCCAATGGATTTCAAAAATGGCG
GCGATATTGCCACTATTAACGCCACTAATGTTGATGCGGACAAAATAGCTAGCGATAATCCTATTTATGCTTCCATAGAG
CCCGACATTACCAAACAATACGAAACAGAAAAAACCATTAAGGATAAGAATTTAGAAGCTAAATTAGCTAAGGCTTTAGG
TGGCAATAAAAAAGATGACGATAAAGAAAAAAGTAAAAAATCCACAGCAGAAGCTAAAGTAGAAAGCAATAAGATAGACA
AAGATGTCGCAGAAACTGCTAAGAATATCAGTGAAATCGCTCTTAAGAACAAAAAAGAAAAGAATGGGGAATTTGTAGAT
GAAAATGGTAATCCCATTGATGACAAAAAGAAAGCAGAAAAACAAGATGAAACAAGCCCTGTCAAACAGGCCTTTATAGG
CAAGAGTGATCCCACATTTGTTTTAGCGCAATACACCCCCATTGAAATCACTCTGACTTCTAAAGTAGATGCCACTCTCA
CAGGTATAGTGAGTGGGGTTGTAGCCAAAGATGTATGGAACATGAACGGCACTATGATTTTACTAGATAAAGGCACTAAG
GTGTATGGGAATTATCAAAGCGTGAAAGGTGGCACACCTATTATGACACGCTTAATGATAGTCTTTACTAAAGCCATTAC
GCCTGATGGTGTGATAATACCTCTAGCAAACGCTCAAGCAGCAGGCATGTTGGGTGAAGCAGGGGTAGATGGCTATGTGA
ATAATCACTTTATGAAGCGCATAGGCTTTGCTGTGATAGCAAGCGTGGTTAATAGCTTCTTGCAAACTGCGCCTATCATA
GCTCTAGATAAACTCATAGGTCTTGGCAAAGGTAGAAGTGAAAGGACACCTGAATTTAATTACGCTTTGGGTCAAGCTAT
CAATGGTAGTATGCAAAGTTCAGCCCAGATGTCTAATCAAATTCTAGGGCAACTGATGAATATCCCCCCAAGTTTTTACA
AAAATGAGGGCGATAGTATTAAGATTCTCACAATGGACGATATTGATTTTAGTGGCGTGTATGATGTTAAAATTACCAAC
AAATCTGTGGTAGATGAAATTATCAAACAAAGCACTAAAACTTTGTCTAGAGAACATGAAGAAATCACCACAAGCCCCAA
AGGTGGCAATTAA
|
| Protein sequence : | |
MNEENDKLETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDHHLNNPTETKTNFDGDKSEETQTQMDSGGDETSES
SNGSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNEEDDQENNGYQEETQTGLIDDETSKKTQQHSPQDLSNEEATEI
NHFEDSSKESKESSDPYLDNPTETKTNFDGDKSEETQTQMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLD
EETQELNEEDDQENNGYQEETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDNPTETKTNFDG
DKSEETQTQMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNEEDDQENNGYQEETQTGLIDDET
SKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDNPTETKTNFDEDKSEEITNDSNDQEIIKGSKKKYIIGGIVV
AVLIVIILFSRSIFHYFMPLEDKSSRFSKDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPNRTLYNYLNIA
EIEDKNPLRAFYECISNGGNYEECLKLIKDKKLQDQMKKTLEAYNDCIKNAKTEEERIKCLDLIKDENLKKSLLNQQKVQ
VALDCLKNAKTDEERKECLKLINDPEIREKFRKELELQKELQEYKDCIKNAKTEAEKNECLKGLSKEAIERLKQQALDCL
KNAKTDEERNECLKNIPQDLQKELLADMSVKAYKDCVSKARNEKEKQECEKLLTPEARKKLEQQVLDCLKNAKTDEERKK
CLKDLPKDLQSDILAKESVKAYKDCVSQAKNEAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKKECEKL
LTPEARKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLLTPEARKLLEQQALDCLKNAKTDEERKKCLKDLPKDLQKKVL
AKESVKAYLDCVSQAKTEAEKKECEKLLTPEARKLLEEAKESIKAYKDCVSKARNEKEKKECEKLLTPEAKKLLEEEAKE
SVKAYLDCVSQAKTEAEKKECEKLLTPEAKKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLLTPEAKKLLEQQALDCLK
NAKTEADKKRCVKDLPKDLQKKVLAKESVKAYKDCVSRARNEKEKKECEKLLTPEAKKLLEEAKKSVKAYLDCVSQAKTE
AEKKECEKLLTPEAKKLLEEAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSVKAYLDCVSQAKTEAEK
KECEKLLTPEARKFLAKQVLNCLEKAGNEEERKACLKNLPKDLQENVLAKESLKAYKDCLSQARNEEERRACEKLLTPEA
RKLLEQEVKKSVKAYLDCVSRARNEKEKKECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRAAIMKCLDGLSDEE
KLKYLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQEIQNKRTQSKQNQLSKTERLHQASECLDNLDDPTDQQAIEQC
LEGLSDSERALILGIKRQADEVDRIYSDLRNRKTFDNMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIE
PDITKQYETEKTIKDKNLEAKLAKALGGNKKDDDKEKSKKSTAEAKVESNKIDKDVAETAKNISEIALKNKKEKNGEFVD
ENGNPIDDKKKAEKQDETSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTGIVSGVVAKDVWNMNGTMILLDKGTK
VYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPLANAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPII
ALDKLIGLGKGRSERTPEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYDVKITN
KSVVDEIIKQSTKTLSREHEEITTSPKGGN
|
|
