Name : cagY
Accession : AGC69786.1
PAI name : cag PAI
PAI accession : JQ685134
Strain : Helicobacter pylori 2017
Virulence or Resistance: Virulence
Product : cag pathogenicity island protein Y
Function : -
Note : -
Homologs in the searched genomes : 26 hits ( 26 protein-level )
Publication :
-Barrozo,R.M., Cooke,C.L., Hansen,L.M., Lam,A.M., Gaddy,J.A., Johnson,E.M., Cariaga,T.A., Suarez,G., Peek,R.M. Jr., Cover,T.L. and Solnick,J.V., "Functional Plasticity in the Type IV Secretion System of Helicobacter pylori", PLoS Pathog. 9 (2), E1003189 (2013) PUBMED 23468628.
-Hansen,L.M., "Direct Submission", Submitted (17-FEB-2012) Center for Comparative Medicine, University of California, Davis, County Road 98 & Hutchison Drive, Davis, CA 95616, USA.
| DNA sequence : | |
ATGAATGAAGAAAACGATAAACTTGAAACTTCTAAAAAAACCCAACAACATTCACCCCAAGATTTATCCAATGAAGAAGC
AACAGAGATCAATCACTTTGAAGATTCTTCAAAAGAATCCAAAGAAAGCTCAGATCATCATCTTAACAACCCTACAGAAA
CTAAAACCAATTTTGATGGAGACAAGTCAGAAGAAACCCAAACTCAAATGGATTCTGGTGGTGATGAAACTTCAGAATCT
AGCAATGGCAGTCTAGCAGACAAGTTATTCAAAAAAGCCAGAAAATTAGTTGATAATAAAAGACCTTTCACTCAGCAAAA
GAATTTAGATGAAGAAACCCAAGAACTGAACGAAGAAGACGATCAAGAAAATAATGGGTATCAAGAAGAAACTCAAACGG
GCTTAATTGATGATGAAACTTCTAAAAAAACCCAACAACATTCACCCCAAGATTTATCCAATGAAGAAGCAACAGAGATC
AATCACTTTGAAGATTCTTCAAAAGAATCCAAAGAAAGCTCAGATCCTTATCTTGATAACCCCACAGAAACTAAAACCAA
TTTTGATGGAGACAAGTCAGAAGAAACCCAAACTCAAATGGATTCTGGTGGTGATGAAACTTCAGAATCTAGCAATGGCA
GTCTAGCAGACAAGTTATTCAAAAAAGCCAGAAAATTAGTTGATAATAAAAGACCTTTCACTCAGCAAAAGAATTTAGAT
GAAGAAACCCAAGAACTGAACGAAGAAGACGATCAAGAAAATAATGGGTATCAAGAAGAAACTCAAACGGGCTTAATTGA
TGATGAAACTTCTAAAAAAACCCAACAACATTCACCCCAAGATTTATCCAATGAAGAAGCAACAGAGATCAATCACTTTG
AAGATTCTTCAAAAGAATCCAAAGAAAGCTCAGATCCTTATCTTGATAACCCCACAGAAACTAAAACCAATTTTGATGGA
GACAAGTCAGAAGAAACCCAAACTCAAATGGATTCTGGTGGTGATGAAACTTCAGAATCTAGCAATGGCAGTCTAGCAGA
CAAGTTATTCAAAAAAGCCAGAAAATTAGTTGATAATAAAAGACCTTTCACTCAGCAAAAGAATTTAGATGAAGAAACCC
AAGAACTGAACGAAGAAGACGATCAAGAAAATAATGGGTATCAAGAAGAAACTCAAACGGGCTTAATTGATGATGAAACT
TCTAAAAAAACCCAACAACATTCACCCCAAGATTTATCCAATGAAGAAGCAACAGAGATCAATCACTTTGAAGATTCTTC
AAAAGAATCCAAAGAAAGCTCAGATCCTTATCTTGATAACCCCACAGAAACTAAAACCAATTTTGATGAAGACAAGTCAG
AAGAAATAACTAACGACTCTAACGATCAAGAAATTATCAAAGGAAGCAAAAAGAAATATATTATTGGTGGCATTGTAGTC
GCTGTTCTTATCGTGATTATTTTATTTTCTAGAAGCATTTTTCACTACTTCATGCCTTTGGAAGATAAAAGCTCTCGTTT
TAGCAAAGACAGGAATCTTTATGTTAATGATGAAATCCAAATAAGGCAAGAGTATAACCGATTGCTGAAAGAACGGAATG
AAAAAGGCAATATGATCGATAAGAATCTTTTCTTCAATGACGATCCCAATAGAACCTTATACAACTATTTAAATATTGCA
GAAATTGAGGACAAAAACCCGTTGAGAGCCTTTTATGAATGTATTAGTAATGGTGGCAACTATGAAGAATGTTTGAAGCT
TATCAAAGACAAAAAACTTCAAGATCAGATGAAAAAGACTCTAGAGGCTTATAATGACTGCATCAAAAATGCCAAAACTG
AAGAAGAAAGGATCAAGTGTTTAGATTTAATCAAAGATGAAAACCTGAAAAAAAGCTTACTGAACCAACAAAAAGTTCAA
GTGGCGCTAGATTGTTTGAAAAACGCTAAAACTGATGAAGAACGGAAAGAGTGCCTAAAACTCATAAATGACCCTGAGAT
TAGAGAGAAATTCCGTAAGGAATTAGAGCTTCAAAAAGAGCTTCAAGAGTATAAGGATTGTATCAAAAACGCCAAAACAG
AAGCTGAGAAAAACGAATGCTTGAAAGGCTTGTCTAAAGAAGCTATAGAAAGATTGAAACAGCAAGCGCTAGATTGTTTG
AAAAACGCTAAAACTGATGAAGAACGAAACGAGTGCTTGAAAAATATTCCCCAAGACTTGCAAAAAGAACTACTAGCTGA
TATGAGCGTCAAGGCTTACAAGGATTGCGTATCAAAAGCTAGGAATGAAAAAGAGAAACAAGAATGCGAGAAATTACTCA
CGCCTGAAGCGAGGAAAAAGTTAGAACAACAGGTTCTAGATTGTTTGAAAAACGCTAAAACTGATGAAGAACGAAAAAAA
TGTTTGAAAGATCTCCCTAAAGACTTACAAAGCGATATTTTAGCTAAAGAGAGCGTTAAAGCTTATAAAGATTGCGTATC
TCAAGCCAAAACTGAAGCCGAGAAAAAAGAGTGTGAGAAATTACTCACCCCTGAAGCGAGAAAAAAGTTAGAAGAAGCTA
AAAAAAGCGTTAAAGCTTATTTGGACTGCGTATCTCAAGCCAAAAACGAAGATGAGAAAAAAGAATGCGAGAAATTGCTC
ACCCCTGAAGCGAGAAAACTTTTAGAGCAACAAGCGTTAGATTGTTTGAAAAATGCTAAAACCGATGAAGAACGAAAAAA
GTGTTTGAAAGATCTCCCTAAAGACTTGCAGAAAAAGGTTTTAGCCAAAGAGAGCGTTAAGGCTTATTTGGATTGCGTAT
CTCAAGCCAAAACTGAAGCCGAGAAAAAAGAATGCGAGAAATTACTCACGCCTGAAGCGAGAAAACTCTTAGAAGAGGCT
AAAGAGAGCATTAAAGCTTATAAAGACTGCGTATCAAAAGCTAGGAATGAAAAAGAGAAAAAAGAATGCGAGAAATTGCT
CACCCCTGAAGCGAAAAAACTTTTAGAAGAAGAAGCCAAAGAGAGCGTTAAAGCTTACTTAGATTGCGTATCTCAAGCCA
AAACTGAAGCTGAGAAAAAAGAATGCGAGAAATTGCTCACCCCTGAAGCGAAAAAAAAGTTAGAAGAAGCTAAAAAAAGC
GTTAAAGCTTATTTGGATTGCGTATCTCAAGCCAAAAACGAAGATGAGAAAAAAGAATGCGAGAAATTGCTCACCCCTGA
AGCGAAAAAACTTTTAGAACAACAAGCGCTAGATTGTTTGAAAAACGCTAAAACCGAAGCTGATAAAAAAAGGTGTGTCA
AAGATCTCCCTAAAGACCTGCAGAAAAAGGTTTTAGCTAAAGAGAGCGTTAAAGCTTATAAAGACTGCGTATCAAGAGCT
AGGAATGAAAAAGAGAAAAAAGAATGCGAGAAATTGCTCACCCCTGAAGCGAAAAAACTTTTAGAAGAAGCTAAAAAAAG
CGTTAAGGCTTATTTGGATTGCGTATCTCAAGCCAAAACCGAAGCTGAGAAAAAAGAATGCGAAAAATTGCTCACCCCTG
AAGCGAAAAAACTTTTAGAAGAAGCTAAAGAGAGCCTTAAAGCTTATAAAGACTGCGTATCAAGAGCTAGGAATGAAAAA
GAGAAAAAAGAATGCGAAAAATTGCTCACCCCTGAAGCGAAAAAACTTTTAGAGCAACAAGCGCTAGATTGTTTGAAAAA
CGCTAAAACCGAAGCTGATAAAAAAAGGTGTGTCAAAGATCTCCCTAAAGACTTGCAGAAAAAGGTTTTAGCCAAAGAGA
GCGTTAAGGCTTATTTGGACTGCGTATCAAGAGCTAGGAATGAAAAAGAGAAAAAAGAATGCGAGAAATTACTCACCCCT
GAAGCGAAAAAACTTTTAGAAGAAGCTAAAGAGAGTCTTAAAGCTTATAAAGACTGCCTCTCTCAAGCTAGAAATGAAGA
AGAAAGGAGAGCTTGCGAGAAACTACTCACGCCTGAAGCGAGGAAACTCTTAGAGCAAGAAGTTAAGAAGAGCGTTAAGG
CTTATTTGGATTGCGTATCTCAAGCCAAAACTGAAGCTGAGAAAAAAGAATGCGAGAAATTACTCACCCCTGAAGCGAGA
AAGTTCTTAGCGAAGCAAGTGCTAAATTGTTTGGAAAAAGCTGGAAATGAAGAAGAAAGAAAAGCATGTCTTAAAAATCT
CCCTAAAGACTTACAGGAAAATGTTTTAGCTAAAGAGAGTCTTAAAGCTTATAAAGACTGCCTCTCTCAAGCTAGAAATG
AAGAAGAAAGGAGAGCTTGCGAGAAATTGCTCACCCCTGAAGCGAGAAAACTCTTAGAGCAAGAAGTTAAGAAGAGCGTT
AAGGCTTATTTGGACTGCGTATCAAGAGCTAGGAATGAAAAAGAGAAAAAAGAATGCGAGAAATTGCTCACCCCTGAAGC
GAGGAAATTTTTAGCGAAAGAACTCCAACAAAAAGATAAAGCGATCAAAGATTGCTTGAAAAACGCCGATCCTAACGACA
GAGCGGCTATCATGAAGTGTTTGGATGGTTTGAGCGATGAAGAGAAGCTCAAATACCTGCAAGAAGCTAGAGAAAAGGCT
GTCTTGGATTGTTTGAAAACGGCTAGGACCGATGAAGAAAAAAGGAAATGCCAAAACCTTTATAGCGATTTGATCCAAGA
AATCCAAAATAAAAGGACACAAAGCAAACAAAATCAATTGAGTAAAACAGAAAGATTGCATCAAGCAAGCGAGTGCTTGG
ATAACTTAGATGACCCTACTGATCAACAAGCCATAGAGCAATGTTTAGAGGGCTTGAGCGATAGTGAAAGGGCGCTAATT
CTAGGAATTAAACGACAAGCTGATGAAGTGGATCGGATTTATAGCGATCTAAGAAACCGCAAAACCTTTGATAACATGGC
GGCTAAAGGTTATCCGTTGTTGCCAATGGATTTCAAAAATGGCGGCGATATTGCCACTATTAACGCCACTAATGTTGATG
CGGACAAAATAGCTAGCGATAATCCTATTTATGCTTCCATAGAGCCCGACATTACCAAACAATACGAAACAGAAAAAACC
ATTAAGGATAAGAATTTAGAAGCTAAATTAGCTAAGGCTTTAGGTGGCAATAAAAAAGATGACGATAAAGAAAAAAGTAA
AAAATCCACAGCAGAAGCTAAAGTAGAAAGCAATAAGATAGACAAAGATGTCGCAGAAACTGCTAAGAATATCAGTGAAA
TCGCTCTTAAGAACAAAAAAGAAAAGAATGGGGAATTTGTAGATGAAAATGGTAATCCCATTGATGACAAAAAGAAAGCA
GAAAAACAAGATGAAACAAGCCCTGTCAAACAGGCCTTTATAGGCAAGAGTGATCCCACATTTGTTTTAGCGCAATACAC
CCCCATTGAAATCACTCTGACTTCTAAAGTAGATGCCACTCTCACAGGTATAGTGAGTGGGGTTGTAGCCAAAGATGTAT
GGAACATGAACGGCACTATGATTTTACTAGATAAAGGCACTAAGGTGTATGGGAATTATCAAAGCGTGAAAGGTGGCACA
CCTATTATGACACGCTTAATGATAGTCTTTACTAAAGCCATTACGCCTGATGGTGTGATAATACCTCTAGCAAACGCTCA
AGCAGCAGGCATGTTGGGTGAAGCAGGGGTAGATGGCTATGTGAATAATCACTTTATGAAGCGCATAGGCTTTGCTGTGA
TAGCAAGCGTGGTTAATAGCTTCTTGCAAACTGCGCCTATCATAGCTCTAGATAAACTCATAGGTCTTGGCAAAGGTAGA
AGTGAAAGGACACCTGAATTTAATTACGCTTTGGGTCAAGCTATCAATGGTAGTATGCAAAGTTCAGCCCAGATGTCTAA
TCAAATTCTAGGGCAACTGATGAATATCCCCCCAAGTTTTTACAAAAATGAGGGCGATAGTATTAAGATTCTCACAATGG
ACGATATTGATTTTAGTGGCGTGTATGATGTTAAAATTACCAACAAATCTGTGGTAGATGAAATTATCAAACAAAGCACT
AAAACTTTGTCTAGAGAACATGAAGAAATCACCACAAGCCCCAAAGGTGGCAATTAA
|
| Protein sequence : | |
MNEENDKLETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDHHLNNPTETKTNFDGDKSEETQTQMDSGGDETSES
SNGSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNEEDDQENNGYQEETQTGLIDDETSKKTQQHSPQDLSNEEATEI
NHFEDSSKESKESSDPYLDNPTETKTNFDGDKSEETQTQMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLD
EETQELNEEDDQENNGYQEETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDNPTETKTNFDG
DKSEETQTQMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNEEDDQENNGYQEETQTGLIDDET
SKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDNPTETKTNFDEDKSEEITNDSNDQEIIKGSKKKYIIGGIVV
AVLIVIILFSRSIFHYFMPLEDKSSRFSKDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPNRTLYNYLNIA
EIEDKNPLRAFYECISNGGNYEECLKLIKDKKLQDQMKKTLEAYNDCIKNAKTEEERIKCLDLIKDENLKKSLLNQQKVQ
VALDCLKNAKTDEERKECLKLINDPEIREKFRKELELQKELQEYKDCIKNAKTEAEKNECLKGLSKEAIERLKQQALDCL
KNAKTDEERNECLKNIPQDLQKELLADMSVKAYKDCVSKARNEKEKQECEKLLTPEARKKLEQQVLDCLKNAKTDEERKK
CLKDLPKDLQSDILAKESVKAYKDCVSQAKTEAEKKECEKLLTPEARKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLL
TPEARKLLEQQALDCLKNAKTDEERKKCLKDLPKDLQKKVLAKESVKAYLDCVSQAKTEAEKKECEKLLTPEARKLLEEA
KESIKAYKDCVSKARNEKEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPEAKKKLEEAKKS
VKAYLDCVSQAKNEDEKKECEKLLTPEAKKLLEQQALDCLKNAKTEADKKRCVKDLPKDLQKKVLAKESVKAYKDCVSRA
RNEKEKKECEKLLTPEAKKLLEEAKKSVKAYLDCVSQAKTEAEKKECEKLLTPEAKKLLEEAKESLKAYKDCVSRARNEK
EKKECEKLLTPEAKKLLEQQALDCLKNAKTEADKKRCVKDLPKDLQKKVLAKESVKAYLDCVSRARNEKEKKECEKLLTP
EAKKLLEEAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSVKAYLDCVSQAKTEAEKKECEKLLTPEAR
KFLAKQVLNCLEKAGNEEERKACLKNLPKDLQENVLAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSV
KAYLDCVSRARNEKEKKECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRAAIMKCLDGLSDEEKLKYLQEAREKA
VLDCLKTARTDEEKRKCQNLYSDLIQEIQNKRTQSKQNQLSKTERLHQASECLDNLDDPTDQQAIEQCLEGLSDSERALI
LGIKRQADEVDRIYSDLRNRKTFDNMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDITKQYETEKT
IKDKNLEAKLAKALGGNKKDDDKEKSKKSTAEAKVESNKIDKDVAETAKNISEIALKNKKEKNGEFVDENGNPIDDKKKA
EKQDETSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTGIVSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGT
PIMTRLMIVFTKAITPDGVIIPLANAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGR
SERTPEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYDVKITNKSVVDEIIKQST
KTLSREHEEITTSPKGGN
|
|
