Name : escD (SESS1296_03624)
Accession : AFO66302.1
PAI name : SESS LEE
PAI accession : JQ747523
Strain : Salmonella enterica RSK2980
Virulence or Resistance: Virulence
Product : putative LEE-encoded type III secretion system component
Function : -
Note : -
Homologs in the searched genomes : 12 hits ( 12 protein-level )
Publication :
-Chandry,P.S., Gladman,S., Moore,S.C., Seemann,T., Crandall,K.A. and Fegan,N., "A Genomic Island in Salmonella enterica ssp. salamae Provides New Insights on the Genealogy of the Locus of Enterocyte Effacement", PLoS ONE 7 (7), E41615 (2012) PUBMED 22860002 REMARK Publication Status: Online-Only.
-Gladman,S., Moore,S.C., Seemann,T. and Chandry,P.S., "Direct Submission", Submitted (06-MAR-2012) Division of Food and Nutritional Sciences, CSIRO, 671 Sneydes Road, Werribee, VIC 3030, Australia.
| DNA sequence : | |
ATGCTATCAAAATATAAGATTAAAATAATCAACGGTGCGATGCGAAATCGAGAATTACAGCTTCCCCCCGGAAATGTTAC
AATTGGCACAGAAAATAATGATATAGTGCATTTTCCACTTGAACAAGGAATCGTTAATTTTTCGCTTGATACAAGAGATG
CAAGTGTTTTTCTCTTGTATCATGGTACCTTCTGGATTGAAGGTAAGCCGGAAAATAGTACGGGTGAGCATCTATTGCCA
GAGGGTAAAGTTATTGATGTTGCTGGATGTGCATTTATTCTGGGAGATGCTGATCAAAATATCGCCCTCCAGGAGGTACC
TACCAGGTTTAGCCAGAAACAGAGAAGTAAAAAGAGGGTTCTGGTTGCTGGAACGTTGCTATTTGCTTCTATCGCAGTCG
CCACGGTAACAAGTTACTTTCTCCTTGTTAATCATAAGACAGAGGCGATACCAATAAACCGTCAAGATGTGTATCAACAG
TTAAAAGAGGCCGGACTTAATGCCATTACCCTGGTATGGCATGGTAAAAATGTTGCTGTCTATGGACGATGCAAAAAATC
CACAGAATTAAATATATTCTTCAATTATTTAAAAAATGTCGATATTAATTTCATTAACAATGCGCTTTGTGATGACTTAG
TGATATCTTCAATTAAAGATGTTTTAGAACAATTTGGATATGACGATATTAGTGTATCTGCCGGGGAAAAACCGGGTTTT
TTTACATTAAGAGGTTACATTTTACCATCACCACAATGGAATGAAGTGGAAAAATTGCTGTTAAATACACCAGGAGTCGT
AGGTTGGGATATTCGTCACGATAATAATATAGCATTAGATAATGTCATTACAATGCTTCGAGATAATAATCTTATCAATT
ATTTTAGCGTTATTAAAAAAAATGATGTTATTGTTATCTCAGGTTCTGTATCAAAAGAAGTTGAGCGCAATATTTTATCA
CTAGTAAACGCCTTTAATAATAAAGAAAAAAATATTCATGTATTGTTTCAAAATATTCAGACATATATACCTACCGATCT
ATTTCCAGCCAAAATATTAAGAGTGAGTGGCACATCAAACAATCCCGCGATTGTACTCGATAATGGTACCAGTTTGAGCA
TCGGGAGTATTTTGAAAGGCGGCTATGTGATTGATTCAATTGATCCAGCTAGTGGAATCAACCTCTCCCGACCGGATGAG
TACATTCATATACCGTTGTCGTACTAG
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| Protein sequence : | |
MLSKYKIKIINGAMRNRELQLPPGNVTIGTENNDIVHFPLEQGIVNFSLDTRDASVFLLYHGTFWIEGKPENSTGEHLLP
EGKVIDVAGCAFILGDADQNIALQEVPTRFSQKQRSKKRVLVAGTLLFASIAVATVTSYFLLVNHKTEAIPINRQDVYQQ
LKEAGLNAITLVWHGKNVAVYGRCKKSTELNIFFNYLKNVDINFINNALCDDLVISSIKDVLEQFGYDDISVSAGEKPGF
FTLRGYILPSPQWNEVEKLLLNTPGVVGWDIRHDNNIALDNVITMLRDNNLINYFSVIKKNDVIVISGSVSKEVERNILS
LVNAFNNKEKNIHVLFQNIQTYIPTDLFPAKILRVSGTSNNPAIVLDNGTSLSIGSILKGGYVIDSIDPASGINLSRPDE
YIHIPLSY
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