Name : fim2D
Accession : AFH78429.1
PAI name : KpGI-5
PAI accession : JN181158
Strain : Klebsiella pneumoniae SB3432
Virulence or Resistance: Virulence
Product : putative fimbrial usher protein
Function : -
Note : -
Homologs in the searched genomes : 416 hits ( 416 protein-level )
Publication :
-van Aartsen,J., Stahlhut,S.G., Harrison,E.M., Ou,H.-Y., Krogfelt,K.A., Struve,C. and Rajakumar,K., "Direct Submission", Submitted (24-JUN-2011) Department of Infection, Immunity and Inflammation, University of Leicester-United Kingdom, University Road, Leicester, Leicestershire LE1 9HN, United Kingdom.
-van Aartsen,J.J., Stahlhut,S.G., Harrison,E.M., Crosatti,M., Ou,H.Y., Krogfelt,K.A., Struve,C. and Rajakumar,K., "Characterization of a novel chaperone/usher fimbrial operon present on KpGI-5, a methionine tRNA gene-associated genomic island in Klebsiella pneumoniae", BMC Microbiol. 12 (1), 59 (2012) PUBMED 22520965 REMARK Publication Status: Online-Only.
| DNA sequence : | |
ATGGCTAAACTCTTTATGGCGTTCTTTTTTATTCTGTCGGAGGGGCATGCGCAGACAGAGATCTATTTCAACCCGCGCTT
TTTAGCTGACGATCCTGCTTCAGTGGCGGATCTGTCTGACTTTGAAAATGGACAGGAGGTACCGCCCGGCACTTACCGCG
TCGATATCTACCTGAACGATGGATTTATTACCACGCGCGATGTCACCTTTAACCTCGGCGAAAAAGGTCATGGATTAGAT
CCTTGCCTGGCCCGCAGCCAGCTGGCTGGGATGGGCGTGAACATCGAGGGGATAAAAGGAATCGATCGCCCTACCGCCGA
TACCTGCGTTCCGCTAACCAAACTTATAAACGGTGCGACGACTCATTTTGATGTTGGTCTGCAACGGTTATATCTCACCG
TACCTCAGGCTTTTATGGGCAATCGTGCGCGTGGCTATATTCCGCCCGAACAATGGGATGCCGGCATTAATGCTGGATTG
CTCAACTATAACTTCACTGGTAACAATGTGCATAACGATACCGGCGGCGGCAGCAATTATGCTTGGTTAAACTTGCAAAG
TGGACTTAACCTCGGTGCCTGGCGGCTACGCGATAATACTACCTGGAATTACACTAGTGACGACGGTACTTCACGCAACA
AAAATAAGTGGCAACACGTTAATACTTGGCTGGAGCGCGATATTACGCCCCTACGTTCACGCCTGACCCTAGGAGATAGT
TATACCAATGGAGATATTTTTGACGGCTTCAATTTCCGTGGTACTCAACTCGCCAGTGATGACAACATGTTGCCGGATAG
CCAGAGAGGCTTTGCGCCAGTAATCCATGGTATTGCCCGTAGCACTGCTCAGGTCTCTATCAAACAAAATGGCTATGAGA
TTTATCAGAGTACAGTACCGCCTGGTCCCTTCGCAATTAACGATCTTTATGCTGCGAGTAGTGGTGGCGACCTACAGGTC
ACAATTAAAGAAAACGATGGTACCCGTCAGGTCTTTAGCGTGCCGTGGTCAACGGTACCCGTGCTACAGCGTGAAGGGTA
TACCCGCTATGCGTTGACAGCCGGAGAGTATCGTAGTGGCAACGTTCAGCAGGAAGAGCCTAAGTTCTTTCAGGGGACTG
TTTTACATGGTTTACCCACCGGATGGACAATTTATGGTGGCGCTCAACTTGCTGAACGTTACCGAGCCGTGAACCTCGGC
ATGGGAAAAAATATGGGTGATTTTGGTGCCCTTTCACTGGACATTACTCAGGCGAACGCCACGTTGTCTGACTACAGCGA
TCATCAGGGACAGTCAATTCGCTTTCTGTATAACAAGGCGCTGAGCGATGTAGGTACTAATATCCAGTTAGTGGGTTATC
GCTATTCTACAAAAGGTTATTACAATTTTGCTGATACTACCTATCGCCGGATGAGCGGTTACGACGTACAGACTCAGGAT
GGCGTTATTCAGGTGAAACCGAAATTCACTGATTACTACAACCTTACCTGGAACAAGCGCGGCAAAGTACAGGTGAATGT
TACCCAACAGTTAGGACGTACTGCCACGCTTTATTTGAGCGGCAGCAATCAAACCTACTGGACAACAGGTAAGGCAGACC
AGCAGTTGCAAGCAGGACTGAGCGCCGCGGTTGAAGATATCAACTGGACGCTAAGTTACAGCCTGACCAAAAACGCTTGG
CAGCAAGGACGTGACCAGATGCTGGCGGTTAACGTCAATATTCCATTTAGTCATTGGCTTCGTTCTGACAGCCAATCCTT
ATGGCGCCACACCTCCGCTAGCTACAGTATGTCACACGATCTTAATGGCCGAATGACCAATCTGGCCGGGATTTACGGCA
CTCTTCTGGAAGATAACAACCTGAGCTATAGCGTACAAACTGGCTATGCCAATGGAGGAGAAACCGATACTAGCAGCACT
GGCTATGCCGCACTGAACTACCGTGGCGGCTACGGTAGTGCCAATCTTGGCTACAGTCGCAATGATGGATTCAGGCAACT
CTATTATGGCGTCAGTGGAGGCGTGCTGGCTCACGGGGACGGTGTGACCTTAAGCCAACCGCTGAATGATACAGTGGTAC
TAGTGAAAGCGCCGGGTGCGGATGGGGTCAAAGTGGAAAACCAGACCGGTGTGACCACCGACTGGCGTGGTTATGCGGTT
GTGCCTTACGCCACTGAGTATCGGGAAAACCGAGTGGCTCTTGATACCAATACACTTGCAGATAATGTTGACCTTGATGA
TGCAGTAGTCAGCGTGGTGCCCACCCACGGCGCGATTGTGCGAGCAGATTTCAAAGCCCATGTTGGTGTCAAGTTGCTGA
TAACCCTGACCCGTAAAGGTAAACCGGTACCGTTCGGTGCAATGGTGACTTCAGGCAGCAGTCAGAGCGGCAGTATTGTA
GCTGATAACGGTCAGGCCTATATGAGTGGCATGCCGCTTGCTGGAAGCCTACAGGTTAAATGGGGTGAAGGGGTGGGAGC
TAGCTGTGTGGCCCGTTACCGCTTGCCGGAGGAGAGTCAGCGGCAGTCGCTGAGCCAGCTATCGGCAGAATGCCGTTAA
|
| Protein sequence : | |
MAKLFMAFFFILSEGHAQTEIYFNPRFLADDPASVADLSDFENGQEVPPGTYRVDIYLNDGFITTRDVTFNLGEKGHGLD
PCLARSQLAGMGVNIEGIKGIDRPTADTCVPLTKLINGATTHFDVGLQRLYLTVPQAFMGNRARGYIPPEQWDAGINAGL
LNYNFTGNNVHNDTGGGSNYAWLNLQSGLNLGAWRLRDNTTWNYTSDDGTSRNKNKWQHVNTWLERDITPLRSRLTLGDS
YTNGDIFDGFNFRGTQLASDDNMLPDSQRGFAPVIHGIARSTAQVSIKQNGYEIYQSTVPPGPFAINDLYAASSGGDLQV
TIKENDGTRQVFSVPWSTVPVLQREGYTRYALTAGEYRSGNVQQEEPKFFQGTVLHGLPTGWTIYGGAQLAERYRAVNLG
MGKNMGDFGALSLDITQANATLSDYSDHQGQSIRFLYNKALSDVGTNIQLVGYRYSTKGYYNFADTTYRRMSGYDVQTQD
GVIQVKPKFTDYYNLTWNKRGKVQVNVTQQLGRTATLYLSGSNQTYWTTGKADQQLQAGLSAAVEDINWTLSYSLTKNAW
QQGRDQMLAVNVNIPFSHWLRSDSQSLWRHTSASYSMSHDLNGRMTNLAGIYGTLLEDNNLSYSVQTGYANGGETDTSST
GYAALNYRGGYGSANLGYSRNDGFRQLYYGVSGGVLAHGDGVTLSQPLNDTVVLVKAPGADGVKVENQTGVTTDWRGYAV
VPYATEYRENRVALDTNTLADNVDLDDAVVSVVPTHGAIVRADFKAHVGVKLLITLTRKGKPVPFGAMVTSGSSQSGSIV
ADNGQAYMSGMPLAGSLQVKWGEGVGASCVARYRLPEESQRQSLSQLSAECR
|
|
