Name : orf4b
Accession : AEZ06050.1
PAI name : Tn6167
PAI accession : JN968483_R1
Strain : Acinetobacter baumannii 1656-2
Virulence or Resistance: Not determined
Product : unknown
Function : -
Note : -
Homologs in the searched genomes : 24 hits ( 24 protein-level )
Publication :
-Hamidian,M. and Hall,R.M., "ISAba1 targets a specific position upstream of the intrinsic ampC gene of Acinetobacter baumannii leading to cephalosporin resistance", Unpublished.
-Kenyon,J.J. and Hall,R.M., "Variation in the Complex Carbohydrate Biosynthesis Loci of Acinetobacter baumannii Genomes", PLoS ONE 8 (4), E62160 (2013) PUBMED 23614028 REMARK Publication Status: Online-Only.
-Nigro,S.J. and Hall,R.M., "Tn6167, an antibiotic resistance island in an Australian carbapenem-resistant Acinetobacter baumannii GC2, ST92 isolate", J. Antimicrob. Chemother. 67 (6), 1342-1346 (2012) PUBMED 22351684.
-Nigro,S.J. and Hall,R.M., "Direct Submission", Submitted (28-OCT-2011) School of Molecular Bioscience, The University of Sydney, Building G08, Sydney, NSW 2006, Australia.
-Nigro,S.J., Kenyon,J.J., Hamidian,M., Holt,K.E., Pickard,D., Dougan,G. and Hall,R.M., "Direct Submission", Submitted (16-MAY-2013) School of Molecular Bioscience, The University of Sydney, Building G08, Sydney, NSW 2006, Australia REMARK Sequence update by submitter.
-Nigro,S.J., Kenyon,J.J., Holt,K.E., Pickard,D., Dougan,G. and Hall,R.M., "Direct Submission", Submitted (29-APR-2013) School of Molecular Bioscience, The University of Sydney, Building G08, Sydney, NSW 2006, Australia REMARK Sequence update by submitter.
| DNA sequence : | |
ATGCCTGTTAATAATGATAAAATAACGACTATTGATTGTTTCCCAAATGATAATATTAGTCGAGTGGTTTATCGATATGG
TGGACTCGTTCGAAACGAAGATAACGACTCAACTAATCCTTTTGTTGAAGTGTTATTAATTGAGATTAGAAAAAGTGATC
AATGGTTATTTTTAGATAAGTGCTCAACATTCCTTGTTCCCGTACTTGATCTTGATGCTGTTCAACATGGCAGTATTTGG
GACGGGAATGTTCTGACCAATTACACTTATAGATTTTCAGGAAAACTCATCACAAAACGATTTTCTTTCGACTTCAGCAA
TAATAAACCGAGGAACATAAAACTTTCAGACAAAATTCCGGATACGTCAGAGTACTACATTCCATTAAAAAACTATTTTC
TTCCCAATAAAGTTGATTATGTTCTACAAGGCTATCCATTCACTAAATACACCAATGATTCATATCGGAAAGTGAATCAC
TGCTTAATGCATTCTAATGATGGAACTCAAGTCATCACTTCCTCAATCCATATTTTGCATAGCTTATTCGTCAATCGGAA
GGATATTCGGGGACTCTTATTAAGCACTTCAGGCCAATCTATCATTAACCGCTTTTTAGAATCTTATACAACAGAAGTTG
AGAATGATAATATTGAATATAAAATAAAAATCAGAAAGCCATATGAAGATATTGGCGAAACAGCAATTATATTTCTGGCT
AATCTAGCCTTAAATCCATATGTGCAGACGATAGTCGATAAAATTCAACGAAGTATGGAAGTTACTGAGTTTCATCATCT
TCAGCATGGCACAGGCATAAGATACCCCATTGTATATCCGCCACATCCTACAAAGCTTTTTCTTGAAGCAGAAGGAATTT
GGCTAGATGACAATAAGACACGTTTTTTTATTACTAGAGTGAAAAAATTTGATCCTATTAACGATCACATGATTGATGTC
AATAAAGACCTTACCAATACTGTTTCAAAAACTGATGAAAAAAACCCTCGTCCTCGTGAAAAAAGTCAAAATAAAAATGA
GCATATCAATACACAAAAACCACCATCAAGAACAAGCGGTGAATACCGTAAGCGTTCTGATGTGGAAACTGGAAATACAC
AAAATATTTTGAAGTATTCTTTTAATGAACCAGCCAATGACCCAATTGAAGTTGGCACATCCAATCATCCATATTCAGAT
AAATCAGAGGATGTTGAAACATCATCTGATGAACCATATGGCAATAAAAATACTAAAACTAAAAAGTCTGAAACAACTGA
TAATCCGCCTAGCAGAGATGAACGCTTTGATATTCAATATATTATTCAATCACTTAACCATTTAACACTAGATACAACCT
CTCCATTAGAACGTGTGTATTCAATTGATATATTGGGGAATGAGATACACGGATTCAACTTACTTCAAATAAAGAAACTC
GTTCCTCAACCAAAGCATCCATCTTGGATTGATGCAGAATTTGGAAGGAAATTGTTATTTTTAAAACTGGAATTGAAAGA
TCAGCATGATCAATATTATTTAATTGATATACATAAAAATAAAAGCCATGAAGCATTCTGTGCTTTTATTATCGTGTCAC
CACATAAGTTAACCCGTGAGCAAATAAAAAATATATGTATAGAGCTTGAGAATGCAAAAGGAATTAAAAAATGGACGCTA
CGTTGTGAAAGTTTTACCAAAAAAATTATTTCGATTAAACATTCATCTGCTACTCCCGATGAGTGGAAAAATAGATTTAA
AAATTTATTTTCAACATTAATTAATTGA
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| Protein sequence : | |
MPVNNDKITTIDCFPNDNISRVVYRYGGLVRNEDNDSTNPFVEVLLIEIRKSDQWLFLDKCSTFLVPVLDLDAVQHGSIW
DGNVLTNYTYRFSGKLITKRFSFDFSNNKPRNIKLSDKIPDTSEYYIPLKNYFLPNKVDYVLQGYPFTKYTNDSYRKVNH
CLMHSNDGTQVITSSIHILHSLFVNRKDIRGLLLSTSGQSIINRFLESYTTEVENDNIEYKIKIRKPYEDIGETAIIFLA
NLALNPYVQTIVDKIQRSMEVTEFHHLQHGTGIRYPIVYPPHPTKLFLEAEGIWLDDNKTRFFITRVKKFDPINDHMIDV
NKDLTNTVSKTDEKNPRPREKSQNKNEHINTQKPPSRTSGEYRKRSDVETGNTQNILKYSFNEPANDPIEVGTSNHPYSD
KSEDVETSSDEPYGNKNTKTKKSETTDNPPSRDERFDIQYIIQSLNHLTLDTTSPLERVYSIDILGNEIHGFNLLQIKKL
VPQPKHPSWIDAEFGRKLLFLKLELKDQHDQYYLIDIHKNKSHEAFCAFIIVSPHKLTREQIKNICIELENAKGIKKWTL
RCESFTKKIISIKHSSATPDEWKNRFKNLFSTLIN
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