Name : tnpA
Accession : AET25383.1
PAI name : PAGI-2(C)
PAI accession : JF826500
Strain : Pseudomonas aeruginosa B136-33
Virulence or Resistance: Not determined
Product : TnpA
Function : -
Note : transposase IS26
Homologs in the searched genomes : 724 hits ( 717 protein-level, 7 DNA-level )
Publication :
-Martinez,E., Marquez,C., Ingold,A., Merlino,J., Djordjevic,S.P., Stokes,H.W. and Roy Chowdhury,P., "Diverse Mobilized Class 1 Integrons Are Common in the Chromosomes of Pathogenic Pseudomonas aeruginosa Clinical Isolates", Antimicrob. Agents Chemother. 56 (4), 2169-2172 (2012) PUBMED 22271862.
-Martinez,E., Roy Chowdhury,P. and Stokes,H.W., "Direct Submission", Submitted (20-APR-2011) I3 Institute, University of Technology, Sydney, Harris and Thomas St., Sydney, NSW 2007, Australia.
| DNA sequence : | |
ATGAACCCATTCAAAGGCCGGCATTTTCAGCGTGACATCATTCTGTGGGCCGTACGCTGGTACTGCAAATACGGCATCAG
TTACCGTGAGCTGCAGGAGATGCTGGCTGAACGCGGAGTGAATGTCGATCACTCCACGATTTACCGCTGGGTTCAGCGTT
ATGCGCCTGAAATGGAAAAACGGCTGCGCTGGTACTGGCGTAACCCTTCCGATCTTTGCCCGTGGCACATGGATGAAACC
TACGTGAAGGTCAATGGCCGCTGGGCGTATCTGTACCGGGCCGTCGACAGCCGGGGCCGCACTGTCGATTTTTATCTCTC
CTCCCGTCGTAACAGCAAAGCTGCATACCGGTTTCTGGGTAAAATCCTCAACAACGTGAAGAAGTGGCAGATCCCGCGAT
TCATCAACACGGATAAAGCGCCCGCCTATGGTCGCGCGCTTGCTCTGCTCAAACGCGAAGGCCGGTGCCCGTCTGACGTT
GAACACCGACAGATTAAGTACCGGAACAACGTGATTGAATGCGATCATGGCAAACTGAAACGGATAATCGGCGCCACGCT
GGGATTTAAATCCATGAAGACGGCTTACGCCACCATCAAAGGTATTGAGGTGATGCGTGCACTACGCAAAGGCCAGGCCT
CAGCATTTTATTATGGTGATCCCCTGGGCGAAATGCGCCTGGTAAGCAGAGTTTTTGAAATGTAA
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| Protein sequence : | |
MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDET
YVKVNGRWAYLYRAVDSRGRTVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDV
EHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
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