Name : intB
Accession : ADN38950.1
PAI name : HPI
PAI accession : GQ903041
Strain : Escherichia coli 042
Virulence or Resistance: Not determined
Product : P4-like integrase
Function : -
Note : P4-like integrase from high-pathogenicity island (HPI)
Homologs in the searched genomes : 29 hits ( 25 protein-level, 4 DNA-level )
Publication :
-Schubert,S., Weinert,K., Norenberg,D. and Denamur,E., "Prevalence and phylogenetic history of the TcpC virulence determinant of extraintestinal pathogenic Escherichia coli (ExPEC)", Unpublished.
-Schubert,S., Weinert,K., Norenberg,D. and Denamur,E., "Direct Submission", Submitted (11-SEP-2009) Bacteriology, Max von Pettenkofer-Institut for Hygiene and Microbiology, Marchioninistr. 17, Munich, Bavaria 81377, Germany.
| DNA sequence : | |
CTGGAGGTTGCGTCCCGCACACGGCAGCACCTGAGTAACATAATGCGCCATGCGGTCAATCAGGAGTTAATCGATACGAA
CCCTGCAGCAAACCTTGGCGGCGTGACCACACCTCCTGTCAGACGGCACTATCCTGCCCTGCCGCTGGAGCGGCTGCCTG
AACTGCTTGAACGTATTGGGGCATATCATCAGGGCCGTGAACTGACCCGGCATGCCGTTCTGCTGATGCTGCATGTGTTC
ATTCGCTCCAGTGAACTGCGTTTCGCCCGCTGGTCAGAGATTGATTTCACAAACCGAGTCTGGACGATACCCGCGACGCG
AGAACCCATTATTGGCGTGCGTTATTCCGGCCGCGGGGCAAAAATGCGAATGCCGCATATCGTCCCCCTCTCAGAACAGT
CCATCGCCATTCTGAAACAGATTAAGGATATCACCGGTAATAATGAACTGATCTTCCCCGGCGACCATAACCCGTATAAG
CCAATGTGTGAAAACACGGTCAATAAGGCACTGCGGGTGATGGGTTACGACACGAAAAAGGATATCTGCGGTCACGGCTT
CCGGGCAATGGCATGCAGTGCGCTGATGGAATCGGGTTTATGGGCAAAGGACGCAGTAGAACGCCAGATGAGTCATCAGG
AGCGCAATACCGTGCGCATGGCTTATATTCATAAGGCAGAGCACCTGGAAGCCCGCAAAGCGATGATGCAGTGGTGGTCG
GATTATCTGGAAGCATGCCGAGAATCTTATGCACCGCCTTATACAATTGGTAAAAATAAGTTTATCCCATAG
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| Protein sequence : | |
MEVASRTRQHLSNIMRHAVNQELIDTNPAANLGGVTTPPVRRHYPALPLERLPELLERIGAYHQGRELTRHAVLLMLHVF
IRSSELRFARWSEIDFTNRVWTIPATREPIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYK
PMCENTVNKALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMMQWWS
DYLEACRESYAPPYTIGKNKFIP
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