Name : uvrD2
Accession : ADD91734.1
PAI name : PAI-I AL862
PAI accession : GQ497943
Strain : Escherichia coli 042
Virulence or Resistance: Not determined
Product : putative UvrD/REP helicase-like protein
Function : -
Note : -
Homologs in the searched genomes : 25 hits ( 23 protein-level, 2 DNA-level )
Publication :
-Martinez-Jehanne,V., du Merle,L., Pichon,C., Ma,L., Bouchier,C. and Le Bouguenec,C., "Sequence of the PAI-I of Escherichia coli strain AL862", Unpublished.
-Martinez-Jehanne,V., du Merle,L., Pichon,C., Ma,L., Bouchier,C. and Le Bouguenec,C., "Direct Submission", Submitted (20-AUG-2009) Microbiology, Institut Pasteur, 25-28 Rue du Docteur Roux, Paris 75724, France.
-Martinez-Jehanne,V., Pichon,C., du Merle,L., Poupel,O., Cayet,N., Bouchier,C. and Le Bouguenec,C., "Role of the Vpe Carbohydrate Permease in Escherichia coli Urovirulence and Fitness In Vivo", Infect. Immun. 80 (8), 2655-2666 (2012) PUBMED 22615242.
| DNA sequence : | |
ATGGTCACGATTTATGTTGACGGTGAAAATAAGACTCATAAAATTACCGACTGGACGCTGTGGGCTGGAAATGACGACAG
AGAGGTTATGCTGACCTGTCATTTTCGCAGCGGGAGAAAATATACTCGTCCGCTTTCTGTATGTCAGATAACGCCAACTG
TAAATTTGCGAAATGTTTTCCTCGAAAGGAAAGGGAACGCTGTAACATCCCGGGCTGAACGGGTTATTATATATGGTGAT
AAATATGCTGCTGTTTATTACCGCGAGGGTGAACGACCCTACATCATGAAAACAACCGGTCTTGACTTTCAACAGTGTTC
AGCATTTACAGAGCATGCCGTGTTTAATTACTTGTGTAGGGTGGCTAATGAACGTATTTTTTATGCCCGTGGTAATAACA
GAAATATCGATGAGAATATCCTTAGGCAGATAAGGAAAATAGTTCCTCATCCTGATACCGCCTTGCATGCATACTGTTCA
GGACAGAGTAAAAAACGTGATTCGCCATGGGGTTTGATTTTTCCGTTTGGTCTTAATGAAAGTCAGTTGCTGGCTGTCGA
ACGGGCATTTTCCTCACAGATTTCAGTTATTGAAGGACCACCTGGAACAGGTAAAACACAGACTATACTCAATATTGTTG
CTAATATATTAATTCAGAATAAAACAGTGGCAATTTTGTCCAATAATAACTCAGCTGTCAGTAATGTTTATGAAAAGATG
GACAAACAGCAACTGGGATATGTGGTGGCACGATTGGGGAGTACGGAGAACAGGCAACAGTTTTTTTCAACGTCGATTTC
GCGTTCTGAGGAAGTCTTACCTGACTCACCGTCTGCAAATGCGATTGATGATGTACTTCAACAAGTGAAAAAACACCTGA
ATGCCATTAACCAGGTCGCTTCGTTAAAAGCAGAAATTAATGAGCTGAATATTGAGTATAAATACCTGCAGCAATGGCAG
AGTCAGAATCTTCGACCGGAGGAGCTTTTTTCTCACAAATACCGATTTTCCTCACAAAAAACAACCGACCTGATGGCTTA
TATTCATTACCTTTCTGACAGGCGGATTGGATTCAGAAACAGAATTGATTTGTTGTTAAACTTCAGGATACTGAAAGTCA
AACCATTGATGATTCCGGAGAGAAGGCTGGCACTATTTACTTCTCTTCAGCTTTCTTATTATGAAAAAACTATCCGGGAA
AAACAAATTTCTCTGAATGAATATGAGGAAGTATTTAAAAAATCTGATTTTAAAATTTTACTGGGGCGCCTGACATCATG
GTCTATGCTTTATTTAAAGCAACATCTGCGAAGAAATGTTTCAACAAGAAGTTCATTCTCGGCAGAGACATACAGGGATG
AATTTGACCGTTTTATAAAGCGTTTTCCGGTTATTGGTAGCAGTACGCATTCGGTTATTAACTCTATCGGCAAGGGGGCC
CTTCTTGATTATGTTATTATTGATGAAGCCTCGCAGCAGGATATTGTTCCGGGCATTCTGGGACTGGGATGTGCCCGTAA
TGTAATCGTTGTAGGGGATCGTAAGCAACTTCCACATGTTCCTGTATTACTCCCGAACAGCCCATCTCCACCGGCAGAAT
ACTATAATTGTGAGAAATATAGTCTACTTGATTCGGTTTGTATGTTGTTCAGGAACATGGTGCCAGTAACCCTTCTTAAA
GAGCATTATCGTTGTCATCCTAAAATCATTCAATTTTGTAATAAGCAGTTTTATGATAATGCTCTGATACCGTTAACGGT
TGATTCCGGTGAAGCCTCATTATCTCTGGTCATCACGGCAAAAGGAAACCATACCCGTAATTTTTCAAATCTCAGGGAGC
TTGAATCTCTGGAAGGTCATTACTGGGATGAAGAAAGTAGCAGGGGATACATTGCCCCATATAATGCACAGGTTAATCTG
GCTGAAAAAGTGCTGCCTGCTGATTTTGTGAAATCGACGGTGCATAAATTTCAGGGACGGGAGTGCGATGAAATTGTGTT
TTCCACTGTGCTGGATAAGAAGCGCAGCAGCCAGCACAGTCGGAACATCGCGTTTGTTGATAATCCTGAACTGGTGAATG
TCGCTGTTTCAAGGGCCCGAAATAAATTTACGCTGGTGACTGGTAACGATGTATTTGAACGCCACGCTGGACATATTGCG
GCGCTGATTCGTTACATCAAATACTACGCTGATGACGGAGAGATTTTCGAGAGCCCGGTCATATCAGCATTTGATTTGCT
GTACAGTGAGTATGACAAATCACTGGAACGACTGAATAGTAGATTGAATTCAAATGATTCACACTTTAAGTCAGAACAGA
TTGTGGCCTGCCTGTTGCGGGATATCCTGTCGCAGGATAGTTATCGGAGTATGATGTTTCATTCACAAATAGCGCTGAAT
CAGTTGGTGTTGCTGGAGCGGGGGGATTTTACACACCGTGAACAGTTATTCATGCGTAACCGGGCCAGTTGTGACTTTGT
TGTTTACTATAAGGTCGGGAAGACTCCATTAGGGGTTATTGAAGTGGATGGAGGTTATCATCTGACCAGTGTTCAGGCTG
AACGTGATGAACTTAAAAACAGTATACTGAAGAAATGCGGCCTGCCATTGCTAAGATTACGTACTATAGACAGTGATATA
GAAGGGAAGTTGGGAGCGTTTCTGTCAGGCCTGACAGGCTAA
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| Protein sequence : | |
MVTIYVDGENKTHKITDWTLWAGNDDREVMLTCHFRSGRKYTRPLSVCQITPTVNLRNVFLERKGNAVTSRAERVIIYGD
KYAAVYYREGERPYIMKTTGLDFQQCSAFTEHAVFNYLCRVANERIFYARGNNRNIDENILRQIRKIVPHPDTALHAYCS
GQSKKRDSPWGLIFPFGLNESQLLAVERAFSSQISVIEGPPGTGKTQTILNIVANILIQNKTVAILSNNNSAVSNVYEKM
DKQQLGYVVARLGSTENRQQFFSTSISRSEEVLPDSPSANAIDDVLQQVKKHLNAINQVASLKAEINELNIEYKYLQQWQ
SQNLRPEELFSHKYRFSSQKTTDLMAYIHYLSDRRIGFRNRIDLLLNFRILKVKPLMIPERRLALFTSLQLSYYEKTIRE
KQISLNEYEEVFKKSDFKILLGRLTSWSMLYLKQHLRRNVSTRSSFSAETYRDEFDRFIKRFPVIGSSTHSVINSIGKGA
LLDYVIIDEASQQDIVPGILGLGCARNVIVVGDRKQLPHVPVLLPNSPSPPAEYYNCEKYSLLDSVCMLFRNMVPVTLLK
EHYRCHPKIIQFCNKQFYDNALIPLTVDSGEASLSLVITAKGNHTRNFSNLRELESLEGHYWDEESSRGYIAPYNAQVNL
AEKVLPADFVKSTVHKFQGRECDEIVFSTVLDKKRSSQHSRNIAFVDNPELVNVAVSRARNKFTLVTGNDVFERHAGHIA
ALIRYIKYYADDGEIFESPVISAFDLLYSEYDKSLERLNSRLNSNDSHFKSEQIVACLLRDILSQDSYRSMMFHSQIALN
QLVLLERGDFTHREQLFMRNRASCDFVVYYKVGKTPLGVIEVDGGYHLTSVQAERDELKNSILKKCGLPLLRLRTIDSDI
EGKLGAFLSGLTG
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