Name : tnpA
Accession : ACY75538.1
PAI name : Tn6060
PAI accession : GQ161847
Strain : Pseudomonas aeruginosa B136-33
Virulence or Resistance: Not determined
Product : TnpA
Function : -
Note : transposition module associated with Tn6060
Homologs in the searched genomes : 143 hits ( 143 protein-level )
Publication :
-Chowdhury,P.R., Merlino,J., Labbate,M., Cheong,E.Y., Gottlieb,T. and Stokes,H.W., "Tn6060, a transposon from a genomic island in a Pseudomonas aeruginosa clinical isolate that includes two class 1 integrons", Antimicrob. Agents Chemother. 53 (12), 5294-5296 (2009) PUBMED 19752283.
-Roy Chowdhury,P., Labbate,M. and Stokes,H.W., "Direct Submission", Submitted (14-MAY-2009) Department of Medical and Molecular Biology, Institute for the Biotechnology of Infectious Diseases, University of Technology-Sydney, City Campus, PO box 123 Broadway, Sydney, NSW 2007, Australia.
| DNA sequence : | |
ATGCCGCGTCGCTCGATTCTCTCGGCTACGGAGCGCGACACCTTGCTTGCGTTGCCGGAAAGCCAGGATGACCTGATCCG
CTACTACACCTTCAACGACTCCGACCTGTCGCTGATCCGCCAGCGGCGCGGCGACGCCAACCGCCTGGGCTTCGCGGTGC
AGCTCAGCCTGCTGCGCTACCCCGGCTATGCGTTGGGCACCGACAGCGAGCCGCCCGAGCCGGTCATCCAGTGGGTGGCC
AAGCAAGTTCAGGCCGACCCGGCGAGTTGGTTGAAGTACGGCGAACGCGACGTGACTCGCCGCGAGCACGCCCAGGAACT
GCGCACCTACCTACAACTGGCCCCGTTCGGCCTGTCCGACTTCCGCGCCCTGGTGCGCGAGCTGACCGAGTTGGCCCAGC
AGACCGACAAGGGCTTACTGCTGGCCGGTCAGGCCCTGGAGAGCCTGCGACAGAAGCGGCGCATTCTGCCGGCGTTGAGC
GTAATTGATCGAGCTTGTTCGGAGGCCATTGCGCGGGCCAATCGCCGAGTCTACCGCGCCCTGGTCGAACCACTCACGGA
CTCGCATCGGGCCAAGCTGGACGAGCTGTTGAAGCTCAAGGCCGGCAGCAGCATCACCTGGTTGACCTGGCTGCGACAGG
CACCGCTGAAACCGAACTCCCGCCACATGCTCGAACACATCGAGCGGCTGAAGACATTTCAGCTGGTGGACTTGCCCGAA
GGCCTGGGCCGACACATCCACCAGAACCGCCTGCTCAAGCTGGCCCGCGAGGGTGGGCAGATGACGCCCAAAGACCTCGG
CAAGTTCGAGCCGCAGCGACGCTACGCGACCCTGGCCGCCGTGGTGCTGGAGAGCACCGCGACGGTGATTGATGAGTTGG
TCGATCTGCACGACCGTATCCTGGTCAAGCTGTTCAGCAGCGCGAAGCACAAGCATCAGCAGCAGTTCCAGAAGCAGGGC
AAGGCGATCAACGACAAGGTGCGCCTGTACTCGAAGATCGGCCAGGCTCTGCTGGAAGCCAAGGAAAGCGGTAGCGATCC
CTATGCCGCCATTGAGGCGGTGATTCCCTGGGACGAGTTCACCGAGAGCGTCAGCGAGGCCGAGCTGCTGGCCCGGCCGG
AAGGCTTCGACCATCTGCACCTGGTCGGCGAGAACTTCGCCACTCTGCGCCGTTACACGCCGGCCTTGCTGGAGGTGCTG
GAACTGCGCGCTGCCCCGGCTGCGCAAGGCGTGCTGGCAGCCGTGCAGACCCTGAGCGAGATGAACGCCTACAACCTGCG
CAAGGTGCCGGCCGATGCGCCCACCGCCTTCATCAAGCCGCGCTGGAAGCCGCTAGTGATAACCCCGGAAGGCCTCGACC
GGCGCTTCTACGAAATCTGCGCCCTGTCCGAGCTGAAGAACGCGCTGCGCTCCGGTGACATCTGGGTCAAGGGCTCGCGG
CAGTTCCGCGACTTCGACGACTACCTGCTGCCGGCAGAGAGGTTCGCCGCGCTCAAGCATGCGCAGGCTCTGCCCCTGGC
GATCAACCCGAACAGCAACCAGTACCTGGAAGAGCGCTTGCAGCTGCTGGACGAGCAGCTGGCCACCGTCACCCGCCTGG
CCAAGGACAACGAGCTGCCCGATGCCATCCTCACCGAGTCCGGGCTGAAGATCACCCCGCTGGATTCCGCGGTGCCCAAT
ACCGCGCAGGCGCTGATCGACCAGACCAGCCATTTGCTGCCGCGCATCAAGATCACCGAACTGCTGATGGACGTGGACGA
CTGGACGGGCTTCAGCCGCCACTTCACACACCTGAAGGACGGTGCCGAGGCCAAAGACCGGACATTGCTGCTGTCAGCGA
TCCTGGGCGATGCAATCAACCTCGGGCTGACCAAGATGGCCGAGTCGAGCCCCGGCCTGACCTACGCCAAGCTGTCCTGG
CTGCAAGCCTGGCACATCCGAGACGAAACCTACTCGGCGGCCCTGGCCGAGCTGGTCAACCACCAGTACCGTCATACCTT
CGCCGCTCACTGGGGCGACGGCACGACCTCTTCTTCCGATGGCCAGCGCTTCCGGGCGGGTGGTCGAGGCGAAAGCACCG
GCCACGTCAACCCGAAGTACGGCAGCGAGCCGGGGCGGCTGTTCTACACCCACATCTCCGACCAGTACGCACCGTTCAGC
ACCCGCGTGGTGAATGTCGGCGTGCGCGACTCTACCTATGTGCTCGACGGTCTGCTGTACCACGAGTCCGACTTGCGGAT
CGAGGAGCACTACACTGACACGGCTGGCTTCACCGATCATGTCTTCGCCCTGATGCACCTGCTGGGCTTCCGCTTCGCAC
CGCGCATCCGCGACCTCGGAGAAACCAAGCTGTATGTTCCGAATAGCGTCCAGGACTACCCGACATTGCGCCCAATGGTT
GGCGGCACCCTGAACATCAAGCACGTCCGCGCCCATTGGGACGACATCCTGCGCCTGGCCAGCTCGATCAAGCAGGGCAC
GGTCACCGCCTCGCTGATGCTGCGCAAGCTCGGCAGCTATCCGCGCCAGAACGGCCTGGCCGTGGCCCTGCGCGAGCTGG
GCCGGATCGAGCGCACGCTTTTCATCCTCGATTGGTTGCAAAGCGTCGAGCTGCGCCGGCGCGTGCATGCTGGACTGAAC
AAGGGCGAAGCCCGCAACTCCCTGGCCAGGGCGGTGTTCTTCAACCGCCTCGGCGAGATCAGGGATCGGAGCTTCGAGCA
GCAGCGCTACCGGGCCAGTGGCCTCAACCTGGTGACGGCCGCCATCGTGTTGTGGAACACGGTGTACTTGGAGCGCGCCA
CCCAGGCGATGGGCGATGCGGGGAAGTCGGTGGATGGTGAGCTGCTGCAATACCTGTCGCCGCTGGGGTGGGAGCACATC
AATCTGACCGGCGATTATGTCTGGCGGCAGAGCCGCAGGCTGGAGGACGGGAAGTTTCGGCCGCTAAGGCTGCCCGGAAA
ACCTTAG
|
| Protein sequence : | |
MPRRSILSATERDTLLALPESQDDLIRYYTFNDSDLSLIRQRRGDANRLGFAVQLSLLRYPGYALGTDSEPPEPVIQWVA
KQVQADPASWLKYGERDVTRREHAQELRTYLQLAPFGLSDFRALVRELTELAQQTDKGLLLAGQALESLRQKRRILPALS
VIDRACSEAIARANRRVYRALVEPLTDSHRAKLDELLKLKAGSSITWLTWLRQAPLKPNSRHMLEHIERLKTFQLVDLPE
GLGRHIHQNRLLKLAREGGQMTPKDLGKFEPQRRYATLAAVVLESTATVIDELVDLHDRILVKLFSSAKHKHQQQFQKQG
KAINDKVRLYSKIGQALLEAKESGSDPYAAIEAVIPWDEFTESVSEAELLARPEGFDHLHLVGENFATLRRYTPALLEVL
ELRAAPAAQGVLAAVQTLSEMNAYNLRKVPADAPTAFIKPRWKPLVITPEGLDRRFYEICALSELKNALRSGDIWVKGSR
QFRDFDDYLLPAERFAALKHAQALPLAINPNSNQYLEERLQLLDEQLATVTRLAKDNELPDAILTESGLKITPLDSAVPN
TAQALIDQTSHLLPRIKITELLMDVDDWTGFSRHFTHLKDGAEAKDRTLLLSAILGDAINLGLTKMAESSPGLTYAKLSW
LQAWHIRDETYSAALAELVNHQYRHTFAAHWGDGTTSSSDGQRFRAGGRGESTGHVNPKYGSEPGRLFYTHISDQYAPFS
TRVVNVGVRDSTYVLDGLLYHESDLRIEEHYTDTAGFTDHVFALMHLLGFRFAPRIRDLGETKLYVPNSVQDYPTLRPMV
GGTLNIKHVRAHWDDILRLASSIKQGTVTASLMLRKLGSYPRQNGLAVALRELGRIERTLFILDWLQSVELRRRVHAGLN
KGEARNSLARAVFFNRLGEIRDRSFEQQRYRASGLNLVTAAIVLWNTVYLERATQAMGDAGKSVDGELLQYLSPLGWEHI
NLTGDYVWRQSRRLEDGKFRPLRLPGKP
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