Name : unnamed
Accession : ACU09448.1
PAI name : LEE
PAI accession : GQ338312
Strain : Escherichia coli 042
Virulence or Resistance: Virulence
Product : type III secretion apparatus protein YscD/HrpQ family
Function : -
Note : orf25_71074; similar to the Escherichia coli O157:H7 EDL933 hypothetical protein Z5109 in NP_290258.1; similar to the Escherichia coli O157:H7 str. Sakai EscD in NP_312585.1; similar to the Escherichia coli O157:H7 str. EC4113 type III secretion apparatus
Homologs in the searched genomes : 12 hits ( 12 protein-level )
Publication :
-Zhang,Y., Golds,G., John,S.J., Laing,C.R. and Gannon,V.P.J., "Direct Submission", Submitted (29-JUN-2009) Public Health Agency of Canada, Laboratory for Foodborne Zoonoses, ADRI, Township RD 9-1, Lethbridge, Alberta T1K 3Z4, Canada.
| DNA sequence : | |
ATGTTATCCTCATATAAAATAAAACTTCTCAATGGTGCGATGCGTAATCGGGAATTACAACTTCCGATGGGAAACCTAAC
GCTAGGTACGGAAGATAACGATATTGTTTACTTTCCCCTTGAACAAGGCCTCAATCAGTTTTTACTTGATATACGTGAGG
AAGGTGTTTTCCTTTTATCTCCGGTTGAATTTTGGATTGATGGGCAACCCACGCCCTATGAAGCAGATAAACCATTACCT
GTCGGAAAGGTTATTGATATAGCGGGATGTTGCTTCATCATTGGTGATATTGACCATTCCTTGCCATTGTCTGATGTGCC
AGAAAGGTTCTCTGCCAAAAGTCGACGCAAAAAACGCCTTATCCTGGCGAGCGTGATTGGTGCTACTTTTGCGTTGTCTG
GTGCCATCGGCAGTTACGTTTTGCTTTCCCCAAAAGCTGAACCCCCAACGTTTACCAGAGCTGATGTATATCAGCAGCTA
AAAGAAAACAAACTTCATGCAATCACTCTGGTATGGCATGGGAAAAATATCGCGCTTTATGGGCGTTGCGAATCAACCAC
GGATTTAACTCCATTTTTTAATTACCTAAAAGAAAAAAATATTTTTTATTACAATAATATCATTTGCAATAACCAAATCA
TATCCGCAATTAATGATGTCTTAACGGAATACGGTTACAAAGATATCATTATTACAAAAGGTAATAAGCCTGGATTCTTT
CTGTTATCGGGATACATTCCCCCTTCACCCAAATGGAGCGAGGTTGAAAATCTGTTACTGAATACGCCAGGAGTTGCAGG
ATGGGAAATACACAACAACAGTAACAATAAAATCAATGAACTGGCATCAGAGTTTAAAAAGAATAAACTAATAAACTATG
TCAATATTTTCAAAAAGAATGATGTCATCATTGTTGCGGGGGAAGTTTCTCAACAGAATGAGAGTAAGATCCTTGCCATT
ATAAATGCAATGAACAAAAATAGTAACGCCAAGATACTCTTTCAGAACATTCAGCCGTACATTTCAGCAGATATTTTCCC
CGGAAAAATACTCAGAATCAGCGGTACGATGAAGAATCCAACAATTGCTCTTGATAATGGCACCAGCCTGGGGATTGGTA
GCATTCTGAAAGGAGGCTATGTCATAGACGCGATTGATCCTAAAGATGGTATCAACATCTCCCGCCCAGACGAATATATA
CATATTCCACTGTCGTATTAA
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| Protein sequence : | |
MLSSYKIKLLNGAMRNRELQLPMGNLTLGTEDNDIVYFPLEQGLNQFLLDIREEGVFLLSPVEFWIDGQPTPYEADKPLP
VGKVIDIAGCCFIIGDIDHSLPLSDVPERFSAKSRRKKRLILASVIGATFALSGAIGSYVLLSPKAEPPTFTRADVYQQL
KENKLHAITLVWHGKNIALYGRCESTTDLTPFFNYLKEKNIFYYNNIICNNQIISAINDVLTEYGYKDIIITKGNKPGFF
LLSGYIPPSPKWSEVENLLLNTPGVAGWEIHNNSNNKINELASEFKKNKLINYVNIFKKNDVIIVAGEVSQQNESKILAI
INAMNKNSNAKILFQNIQPYISADIFPGKILRISGTMKNPTIALDNGTSLGIGSILKGGYVIDAIDPKDGINISRPDEYI
HIPLSY
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